Pairwise Alignments

Query, 310 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 305 a.a., nitrogen assimilation transcriptional regulator NAC from Pantoea sp. MT58

 Score = 79.7 bits (195), Expect = 8e-20
 Identities = 71/273 (26%), Positives = 109/273 (39%), Gaps = 23/273 (8%)

Query: 2   LNQQWLATFVTLVEVGHFTHTANKLFMTQPGVSQHIKKLEEQVGVHLLLRKGKRFELTEA 61
           +N + L  FV +V++G  T  A  L + QP +SQ +  LE ++   LL+R  +    TEA
Sbjct: 1   MNLRRLKYFVKIVDIGSLTQAAEVLHIAQPALSQQVATLENELDQQLLIRTKRGVTPTEA 60

Query: 62  GAILYQHARQY-QLAETELLARLQTDNTYVGECRFGCSG--AIASLLYPHFLERQIQYPE 118
           G ILY HAR   +  E    A +       G+   G +   A +SL  P     + Q+PE
Sbjct: 61  GKILYGHARTILRQCEQAQTAVINAGQVLSGQVSIGLAPGTAASSLTMPLLQTVRDQFPE 120

Query: 119 LCVKIEAAPNQRIVSGILTNQLDMGIVTKRGEEADLTYQALGYAELSLVLPSQYLVDKIG 178
           + V +       +   +++ QLDM ++  R   A +    L   +L LV           
Sbjct: 121 VLVYLHENSGSVLNEKVMSGQLDMAVLYDRAPTAGINSMPLMKEDLFLV----------- 169

Query: 179 IELLEQIGFIDHPDGDYYLQQVLQANFGGRAPMVNSRTGSPVKAHTMAFTHHIRRTGYVN 238
                  G  D+P     L  V Q +     P   S     V           R  G + 
Sbjct: 170 -------GATDYPGVSVDLADVAQMSLF--LPRDYSAVRKRVDEAFSLRRLSARIIGEIE 220

Query: 239 QLSQILLPVAKGLGFTVLPLSTVNAFMPRESLW 271
            +S +   ++ G+G TVLP S   A +     W
Sbjct: 221 SISTLTAAISSGMGVTVLPESAARALVGSTDAW 253