Pairwise Alignments

Query, 310 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 293 a.a., LysR family transcripitonal regulator from Herbaspirillum seropedicae SmR1

 Score = 73.6 bits (179), Expect = 5e-18
 Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 13/229 (5%)

Query: 2   LNQQWLATFVTLVEVGHFTHTANKLFMTQPGVSQHIKKLEEQVGVHLLLRKGKRFELTEA 61
           L  + L TFV +VE G  +  A  L  T  GVS+ + +LE+++G  LL R  +R ELTE 
Sbjct: 3   LQSEELRTFVAVVEAGTLSAAAELLAQTTSGVSRALSRLEDKLGASLLTRTTRRMELTEE 62

Query: 62  GAILYQHARQYQLA--ETELLARLQTDNTYVGECRFGCSGA-IASLLYPHFLERQIQYPE 118
           G    + AR    A    +   RL+T    VG+ R   S   +   + PH  + +  YP+
Sbjct: 63  GRAFLEQARAILAAMESAQDSIRLRTRKP-VGKLRVDASAPFMLHCVVPHVGQFRAAYPD 121

Query: 119 LCVKIEAAPNQRIVSGILTNQLDMGIVTKRGEEADLTYQALGYAELSLVLPSQYLV---D 175
             +++E   N R +  ++ ++ D+ I     +++ L  +AL  A L++V    YL    +
Sbjct: 122 --IELELTTNDRFID-LVEHRADIAIRIGELQDSSLHARALSSARLNVVASPAYLARHGE 178

Query: 176 KIGIELLEQIGFIDHPDGDYYLQQVLQANFGGR---APMVNSRTGSPVK 221
              +E LEQ   I     D      L+ + G R    P + + +G  ++
Sbjct: 179 PESVEALEQHQLIGFSQPDQLNHWPLRHSAGDRYQTRPAIRASSGETIR 227