Pairwise Alignments

Query, 310 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 322 a.a., LysR family transcriptional regulator from Herbaspirillum seropedicae SmR1

 Score = 70.1 bits (170), Expect = 7e-17
 Identities = 54/153 (35%), Positives = 76/153 (49%), Gaps = 8/153 (5%)

Query: 3   NQQWLATFVTLVEVGHFTHTANKLFMTQPGVSQHIKKLEEQVGVHLLLRKGKRFELTEAG 62
           N Q L  F  +V  G     A  L +TQP +S+ IK+LEE VG  L  R  K   LT  G
Sbjct: 4   NLQQLEMFNAIVSAGSLGRAAALLNLTQPALSRAIKRLEESVGGALFERHTKGMHLTVLG 63

Query: 63  AILYQHA----RQYQLAETELLARLQTDNTYVGECRFGCSGAIASLLYPHFLERQI-QYP 117
             L  HA    R+ Q A  EL A         G  + G  G+IASL+ P  +   + ++P
Sbjct: 64  QALLPHAMSLQREAQQAREELDA---IRGLAKGVIKVGAVGSIASLVLPLAVRGVLDKWP 120

Query: 118 ELCVKIEAAPNQRIVSGILTNQLDMGIVTKRGE 150
            L V+I      R+V G+LT+++D+ + T  G+
Sbjct: 121 NLRVEIIEGVWDRLVEGLLTHEIDLALSTSGGQ 153