Pairwise Alignments

Query, 527 a.a., alkyl hydroperoxide reductase, F subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 602 a.a., FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  184 bits (467), Expect = 8e-51
 Identities = 164/574 (28%), Positives = 253/574 (44%), Gaps = 81/574 (14%)

Query: 7   KNQLQTYLQNLKRPVELVVSADESKKSQ---------ELKSLVNDIVSLSTFVSLKEAQG 57
           + QL      L  PV L V  D  +K+          E  SL+ D +S+       E   
Sbjct: 25  RKQLTQLFAKLPNPVVLDVFTDGDEKNAFNGYTRRFAEDISLLVDKISMHHHALDSEEAK 84

Query: 58  QR----TPAMTV----VNPALNTQISFAGLPMGHEFTSLVLALLHSGGHPIKLSDDIIEQ 109
           +R    +P + V     +P L+ +I F G P+G E  +LV ++         L++     
Sbjct: 85  RRDVTLSPTLFVGTGEADPKLDYRIRFTGAPLGEEGRALVESIFLVSLRQSGLTETSRRI 144

Query: 110 IRNLPGKYEFETYVSLTCQNCPDVVQALNMMAAINPNITNV-MIDGALFQDEVASRNIMA 168
           +  L    +   + S  C  CP         A   P +     ++   F D      + +
Sbjct: 145 LSELKEPRKPRVFSSPGCPYCPGQFMHAAKCAIERPGLVEAECVNSDEFPDLSKKYGVGS 204

Query: 169 VPSVYLNGEVFAAGRISIGEILNKLDTGAASRKAEELSQKAPYE---------------- 212
           VP    +    A G +     + +L T    + A+EL ++   E                
Sbjct: 205 VPHTQYDDTYKAIGLMPEERFVLELVT---LKSADELMREHGMEPGHEGHDHAHGAHGMD 261

Query: 213 ----------VLVVGGGPAGAAAAIYAARKGLRTGIVADK--FGGQVAETVGIENFISVK 260
                     ++V+G GPAG +AAIY  R G++T +V DK   GGQV  T  +EN+    
Sbjct: 262 PEGLDVVETDMVVLGAGPAGLSAAIYGERSGMKT-VVLDKSVVGGQVTVTPVVENYPGFT 320

Query: 261 ATEGPKLVANLEAHVRDYEVDIMDNQKAVKLASDGLFELELASGAKLRSRTVLLATGARW 320
              G KLV  L AH R Y   + + +   ++    L E+   + A    + ++ ATGA+W
Sbjct: 321 DIAGLKLVEVLSAHARQY-ATVREGETVHEVKIGKLIEV-YTNRAVYLCKALVFATGAQW 378

Query: 321 REMNVPGEKEYRGKGVAYCPHCDGPLFKGKRVAVIGGGNSGIEAAIDLANIVEHVTVLEF 380
           R+++ PGE  + G+GV+YC  CDG +++GKRVA+IGGGNS +  A+ L N+   VT++  
Sbjct: 379 RKLDAPGEGRFYGRGVSYCASCDGFMYRGKRVAMIGGGNSALTDALHLKNLGADVTIIHR 438

Query: 381 DSKLRADDVLQRKAASMGNIKIITQAMTTEVTGD------------------GTR----- 417
               RA+  LQ      G I +I   +  E+ GD                  GT      
Sbjct: 439 RDSFRAEKALQDSLEREG-IAVIWDTVVEEILGDTVAPVREGDGGDGKDAAPGTAPAEPD 497

Query: 418 ---VNGLNYTDRATGESHHIALAGIFVQIGLVPNAEWLKGT-VDLTPRGEIIVDERGQTS 473
              V G+   +  T     +   G+FV IG +PN+E      V L   G I VD   +T+
Sbjct: 498 TGVVRGIRVRNVKTDAVSELPFDGVFVAIGHIPNSEQAAELGVVLEKDGSIKVDRHMRTN 557

Query: 474 VPGVFAAGDVTNSPYKQIIIAMGSGANASLGAFD 507
           +P ++AAGDVT    +QI+ A+GSGA A+L AF+
Sbjct: 558 IPRIYAAGDVTGG-VRQIVTAVGSGATAALAAFE 590