Pairwise Alignments

Query, 527 a.a., alkyl hydroperoxide reductase, F subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 579 a.a., AhpF family protein/thioredoxin reductase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  216 bits (551), Expect = 1e-60
 Identities = 158/462 (34%), Positives = 226/462 (48%), Gaps = 31/462 (6%)

Query: 73  QISFAGLPMGHEFTSLVLALLHSGGHPIKLSDDIIEQIRNLPGKYEFETYVSLTCQNCPD 132
           +I F G P+G E  + + A+         LS      +  L G      + S  C  CP 
Sbjct: 113 RIRFTGAPLGEEARAFIEAIFLVSARTSGLSQAAKTILAQLDGARSPRVFSSPGCPYCPA 172

Query: 133 VVQALNMMAAINPNITNV-MIDGALFQDEVASRNIMAVPSVYLN----------GEVFAA 181
                   A   P++ +   ++   F D  A   + +VP    +           E F  
Sbjct: 173 QCANAIKCAIERPDLVSAECVNADEFPDLSARYGVGSVPHTQFDESYKGIGLMPEERFVV 232

Query: 182 GRISIGEILNKLDTGAASRKAEELS-----------QKAPYEVLVVGGGPAGAAAAIYAA 230
             +++ +    L+  AA   A               +    ++LV+G GPAG +AAIYA 
Sbjct: 233 ELVALKDAERWLNEHAAKGGAHGAGTGQGAGSDAGVEVTETDLLVLGAGPAGLSAAIYAE 292

Query: 231 RKGLRTGIVADK--FGGQVAETVGIENFISVKATEGPKLVANLEAHVRDYEVDIMDNQKA 288
           R GL T +V DK   GGQV  T  +EN+       G KLV  L +H R Y   I +N+  
Sbjct: 293 RSGLAT-VVLDKGIVGGQVTVTPVVENYPGFADIAGIKLVEVLSSHARQY-ATIRENEGV 350

Query: 289 VKLASDGLFELELASGAKLRSRTVLLATGARWREMNVPGEKEYRGKGVAYCPHCDGPLFK 348
             +      E+       L +R VL ATGA+WR+++VPGE  + GKGV+YC  CDG +++
Sbjct: 351 DDIKLGRRIEVHTPRNVFL-ARAVLFATGAQWRKLDVPGEDRFYGKGVSYCASCDGFVYR 409

Query: 349 GKRVAVIGGGNSGIEAAIDLANIVEHVTVLEFDSKLRADDVLQRKAASMGNIKIITQAMT 408
           G++VAV+GGGN+ +  A+ L N+   VTV+      RA+  LQ      G I +I  A+ 
Sbjct: 410 GRKVAVVGGGNTALTDALHLRNLGVEVTVIHRRDTFRAEKALQDSLTREG-IPVIWNAVV 468

Query: 409 TEVTGDGTRVNGLNYTDRATGESHHIALAGIFVQIGLVPNAEWLKGT-VDLTPRGEIIVD 467
            EV GD T V G+   D  TGE+  +   G+FV IG VPN+E      VDL P G I VD
Sbjct: 469 EEVMGD-TEVRGVRLRDTKTGETRDVPFDGVFVAIGHVPNSEQAADLGVDLEPDGSIKVD 527

Query: 468 ERGQTSVPGVFAAGDVTNSPYKQIIIAMGSGANASLGAFDYL 509
              +T++P V+AAGDV     +QI+ A+GSGA A+L AF+ L
Sbjct: 528 RHMRTNIPRVYAAGDVIGG-VRQIVTAVGSGATAALSAFEDL 568