Pairwise Alignments

Query, 398 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 380 a.a., beta-lactamase (RefSeq) from Shewanella loihica PV-4

 Score = 58.9 bits (141), Expect = 2e-13
 Identities = 68/286 (23%), Positives = 116/286 (40%), Gaps = 22/286 (7%)

Query: 95  ISKDSRFVMASLSKQITATLILQAVDAGKLDLTQTLNHYLVGDAKGDNKALKAVVAG-TN 153
           I+ D+ F +AS+SK     L  Q V   KL   Q +N YL   +       +A+  G   
Sbjct: 78  INADTVFRLASVSKTFAGALASQLVHEHKLSWQQPINQYLPNFSLAKPADSQAITLGHVI 137

Query: 154 SSANALNPGRYDERITLHQLLTHTSGVDKLGKANRF-EPGSQFEYSNLGYSLLGQVLEKV 212
             +  L P  YD  +  +  L     + K  +      PG  + Y N+ +S + Q +E+ 
Sbjct: 138 GQSTGLMPNSYDNLVNANVKLNKI--IPKFAELTPICPPGVCYSYQNVAFSFIEQAIEQE 195

Query: 213 NHQSFAEQVAQFATRYQLNGLSAELGSVAAIHTK---VPSLAVGLQESEVIAPSDLVLDE 269
           + Q + E + +      L   +A +G  A  HT     P +       +V    +     
Sbjct: 196 SGQPYEELIDK-RIFVPLAMETASIGYEAFTHTSNRAEPHIKTKHGFKQVKVKPNYY--- 251

Query: 270 ALLPAGGLIASAPAYAAF--QQQLHAGKLLSAESYQWMTTA---------HTEIQFLWPN 318
            L PA G+ AS    A +      H  K+LS +  + +TT            + +    +
Sbjct: 252 QLAPAAGVNASIKDMAKWLMANMGHEPKVLSPQVLEDITTPGVRTTKELRRRDWKPYLDD 311

Query: 319 MHYGYGVRINKDDSLIEYSHTGYLTGYMSMTLHYPEFNVNLVMLEN 364
            HYG G RI + +      H G++ GY++   + PE ++ + +L N
Sbjct: 312 AHYGKGWRIYQFNGHRLIYHAGWVAGYVTEVAYSPELDIGIAILLN 357