Pairwise Alignments

Query, 105 a.a., conserved domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 1107 a.a., Ankyrin-like protein from Xanthomonas campestris pv. campestris strain 8004

 Score = 47.0 bits (110), Expect = 6e-10
 Identities = 26/73 (35%), Positives = 39/73 (53%)

Query: 16  AVKRIIANGADLECVDENGMTALLHACELQSFEILKLLVDAGADVNHPNAQGYQPLDIAY 75
           AV  ++ANGAD    D +G T L HA       +  LL DA A+++  N +G+ PL +A 
Sbjct: 323 AVMTLLANGADPRATDNDGNTPLHHAVRSSDPGVAALLRDAAAELDALNNEGHSPLAMAC 382

Query: 76  WQGEFRMGCYTAE 88
             G +R+  +  E
Sbjct: 383 QVGNWRLAKFLLE 395



 Score = 40.8 bits (94), Expect = 4e-08
 Identities = 28/77 (36%), Positives = 40/77 (51%)

Query: 2   STELIHAVKAKDTLAVKRIIANGADLECVDENGMTALLHACELQSFEILKLLVDAGADVN 61
           +T L  AV  + T  V  ++A GA +E     G+T L+ AC L   +I+  L+ AGADV+
Sbjct: 887 ATPLSAAVSMRQTEIVAALLAAGAQIEHRLPGGVTVLMLACALGLPDIVARLLAAGADVH 946

Query: 62  HPNAQGYQPLDIAYWQG 78
             + QG   L  A   G
Sbjct: 947 ANDDQGLAALHCAALYG 963



 Score = 38.1 bits (87), Expect = 3e-07
 Identities = 24/67 (35%), Positives = 31/67 (46%)

Query: 8   AVKAKDTLAVKRIIANGADLECVDENGMTALLHACELQSFEILKLLVDAGADVNHPNAQG 67
           A    DT AV+R+I  G  ++ VD  G TALL A       ++  L+  GAD       G
Sbjct: 827 AAMTGDTDAVRRLIDLGLPVDAVDAQGCTALLRAAGSGHLAVVTHLLGRGADPQRAANSG 886

Query: 68  YQPLDIA 74
             PL  A
Sbjct: 887 ATPLSAA 893



 Score = 37.0 bits (84), Expect = 6e-07
 Identities = 23/55 (41%), Positives = 28/55 (50%)

Query: 20  IIANGADLECVDENGMTALLHACELQSFEILKLLVDAGADVNHPNAQGYQPLDIA 74
           ++ +G D E  D +GMTAL  A  L     LKLLV  GA      A G  PL +A
Sbjct: 741 LLEHGVDREARDSHGMTALHLATALGREASLKLLVKQGASPEARAADGQTPLGVA 795



 Score = 33.9 bits (76), Expect = 5e-06
 Identities = 21/72 (29%), Positives = 33/72 (45%)

Query: 3   TELIHAVKAKDTLAVKRIIANGADLECVDENGMTALLHACELQSFEILKLLVDAGADVNH 62
           T L+ A  +     V  ++  GAD +    +G T L  A  ++  EI+  L+ AGA + H
Sbjct: 855 TALLRAAGSGHLAVVTHLLGRGADPQRAANSGATPLSAAVSMRQTEIVAALLAAGAQIEH 914

Query: 63  PNAQGYQPLDIA 74
               G   L +A
Sbjct: 915 RLPGGVTVLMLA 926



 Score = 33.5 bits (75), Expect = 7e-06
 Identities = 16/57 (28%), Positives = 32/57 (56%)

Query: 2   STELIHAVKAKDTLAVKRIIANGADLECVDENGMTALLHACELQSFEILKLLVDAGA 58
           +T L HAV++ D      +    A+L+ ++  G + L  AC++ ++ + K L++ GA
Sbjct: 342 NTPLHHAVRSSDPGVAALLRDAAAELDALNNEGHSPLAMACQVGNWRLAKFLLERGA 398



 Score = 26.6 bits (57), Expect = 8e-04
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 10/57 (17%)

Query: 34  GMTALLHACE--------LQSFEILKLLVDAGADVNHPNAQGYQPLDIAYWQGEFRM 82
           G+T LL AC         L+ F +   L++ GAD   P+A G  PL +A   G  R+
Sbjct: 683 GLTRLLSACVQHDAASRGLEQFALE--LLERGADPFAPSAAGDPPLSLAVRLGWLRL 737