Pairwise Alignments

Query, 105 a.a., conserved domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 195 a.a., ankyrin from Cupriavidus basilensis FW507-4G11

 Score = 51.2 bits (121), Expect = 6e-12
 Identities = 29/78 (37%), Positives = 42/78 (53%)

Query: 5  LIHAVKAKDTLAVKRIIANGADLECVDENGMTALLHACELQSFEILKLLVDAGADVNHPN 64
          L+ A    D   VKR++A+GA  +  DE G +ALL A   +  E+ K LV AGADVN  +
Sbjct: 4  LLAAATLGDLELVKRLLASGASAQAADERGRSALLVAVYSRHTEVAKALVAAGADVNRKD 63

Query: 65 AQGYQPLDIAYWQGEFRM 82
           +   P  +A   G+  +
Sbjct: 64 MESNSPFLLAAATGQLEL 81



 Score = 48.5 bits (114), Expect = 4e-11
 Identities = 24/55 (43%), Positives = 36/55 (65%)

Query: 17  VKRIIANGADLECVDENGMTALLHACELQSFEILKLLVDAGADVNHPNAQGYQPL 71
           V++ +A+GADL   D    TAL+ ACE  + E++K+L+ AG  V+H N QG+  L
Sbjct: 82  VQQALAHGADLNSTDSYDNTALIAACEHGNTEVVKVLLKAGVAVDHINRQGWTAL 136



 Score = 35.4 bits (80), Expect = 3e-07
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 5/74 (6%)

Query: 2   STELIHAVKAKDTLAVKRIIANGADLECVDENGMTALLHACEL-----QSFEILKLLVDA 56
           +T LI A +  +T  VK ++  G  ++ ++  G TALL    +     +  + ++LL+DA
Sbjct: 100 NTALIAACEHGNTEVVKVLLKAGVAVDHINRQGWTALLETIVMGDGSARYEDTVQLLLDA 159

Query: 57  GADVNHPNAQGYQP 70
           GAD N  +  G  P
Sbjct: 160 GADANLADRDGTTP 173



 Score = 25.0 bits (53), Expect = 5e-04
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 17  VKRIIANGADLECVDENGMTALLHACELQSFEILKLLV 54
           V+ ++  GAD    D +G T   HA E     ++K+LV
Sbjct: 153 VQLLLDAGADANLADRDGTTPTRHARERSYKTMVKMLV 190