Pairwise Alignments

Query, 405 a.a., NADH:ubiquinone oxidoreductase, Na translocating, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 394 a.a., flavohemoprotein from Vibrio cholerae E7946 ATCC 55056

 Score = 65.5 bits (158), Expect = 3e-15
 Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 13/167 (7%)

Query: 239 PGKMSSYIFN-LKAGDKVTISGPFGEFFVKDTDAEMVFIGGGAGMAPMRSHIFDQLKSKK 297
           PG +S Y+ N +K GD V +  P G+FF  + +  +V I  G G  PM++ +     +K+
Sbjct: 233 PGLVSHYLHNNVKVGDSVKLYAPAGDFFYVERERPVVLISAGVGATPMQAIL--HTLAKQ 290

Query: 298 TKRKMSFWYGARSTREVFYQQDFDTLAAENDNFVWHVALSEPLPEDNWTGYTGFIHNVLY 357
            K  +++ Y   S +E  + Q+   L A+   ++  V   +   +D   G       +L 
Sbjct: 291 NKSGVTYLYACNSAKEHTFAQETAQLIAQ-QGWMQQVWYRDESADDVLQGEMQLAELIL- 348

Query: 358 ENYLKNHKAPEDCEFYMCGPPIMNSSVIKMLESLGVEPENILLDDFG 404
                     ED +FY+CGP      V+K L +LGV+   I  + FG
Sbjct: 349 --------PIEDGDFYLCGPIGFMQYVVKQLLALGVDKARIHYEVFG 387