Pairwise Alignments

Query, 405 a.a., NADH:ubiquinone oxidoreductase, Na translocating, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 403 a.a., ferredoxin-NADP oxidoreductase from Synechococcus elongatus PCC 7942

 Score = 59.3 bits (142), Expect = 2e-13
 Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 24/181 (13%)

Query: 240 GKMSSYIFNLKAGDKVTISGPFGEFFV--KDTDAEMVFIGGGAGMAPMRSHIFDQLKSKK 297
           G  S+++  LK GD V I+GP G+  +   DTDA ++ +G G G+AP R++++   K  +
Sbjct: 215 GVCSTFLCGLKPGDDVKITGPVGKEMLLPADTDANVIMMGTGTGIAPFRAYLWRMFKDNE 274

Query: 298 TKRKMSF------W--YGARSTREVFYQQDFDTLAAE-NDNFVWHVALSEPLPEDNWTGY 348
                 +      W  +G  +T  + Y+++ + L A+  DNF    A+S    + N  G 
Sbjct: 275 RAINSEYQFNGKAWLIFGIPTTANILYKEELEALQAQYPDNFRLTYAISR--EQKNEAGG 332

Query: 349 TGFIHNVLYE------NYLKNHKAPEDCEFYMCGPPIMNSSVIKMLESLGVEPENILLDD 402
             +I + + E      N LK+ K       Y+CG   M   + + + ++    E+++  D
Sbjct: 333 RMYIQDRVAEHADEIWNLLKDEKT----HVYICGLRGMEDGIDQAM-TVAAAKEDVVWSD 387

Query: 403 F 403
           +
Sbjct: 388 Y 388