Pairwise Alignments

Query, 405 a.a., NADH:ubiquinone oxidoreductase, Na translocating, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 405 a.a., Na(+)-translocating NADH-quinone reductase subunit F (RefSeq) from Shewanella amazonensis SB2B

 Score =  699 bits (1803), Expect = 0.0
 Identities = 332/404 (82%), Positives = 368/404 (91%)

Query: 1   MEMAIGIGMFTLVVCLLVIVILIAKKKLVTTGEITIGINDDAEKSIKVAAGDKLLGALAS 60
           MEM IG+GMFT+VVC+LV VILIA+ KLV +G++ + IN+D +K++ V AG KLLGALA 
Sbjct: 1   MEMTIGMGMFTVVVCILVAVILIARSKLVASGDVQLRINEDKDKTVAVPAGGKLLGALAG 60

Query: 61  KNIFIPSACGGGGTCGQCRVKVKSGGGDILPTELGHITKKEAKEGCRLACQVAVKTDMEL 120
           KNIF+PSACGGGGTCGQCRVKVKSGGGDILPTEL HITKKEAKEGCRLACQVAVK+DM+L
Sbjct: 61  KNIFVPSACGGGGTCGQCRVKVKSGGGDILPTELDHITKKEAKEGCRLACQVAVKSDMDL 120

Query: 121 ELEEEIFGVKKWQCEVISNDNKATFIKELLLKLPEGEDVHFKAGGYIQIEAPAHVVKYAD 180
           EL++EIFGVKKW+CEVISN + AT+IKELLLK+PEGE+VHFKAGGYIQIEAPAH V Y D
Sbjct: 121 ELDDEIFGVKKWECEVISNRSTATYIKELLLKVPEGEEVHFKAGGYIQIEAPAHEVHYKD 180

Query: 181 FDIPAKYRDDWEKYGLFDLVSTVNEDVLRAYSMANYPDEKGRIMLNVRIATPPSANVPPG 240
           FDIP  +RDDWEKYGLF+LVS V+ +V+RAYSMANYP+E+GRIMLNVRIATPPS  +PPG
Sbjct: 181 FDIPEIFRDDWEKYGLFNLVSRVDSEVMRAYSMANYPEEQGRIMLNVRIATPPSPELPPG 240

Query: 241 KMSSYIFNLKAGDKVTISGPFGEFFVKDTDAEMVFIGGGAGMAPMRSHIFDQLKSKKTKR 300
           +MSSYIFNLK GDKV ISGPFGEFFVK+TDAEMVFIGGGAGMAPMRSHIFDQLK  KT R
Sbjct: 241 QMSSYIFNLKPGDKVIISGPFGEFFVKETDAEMVFIGGGAGMAPMRSHIFDQLKRVKTSR 300

Query: 301 KMSFWYGARSTREVFYQQDFDTLAAENDNFVWHVALSEPLPEDNWTGYTGFIHNVLYENY 360
           KMSFWYGARS REVFYQ+DFD LAA+N NF WH+ALSEPLPEDNWTGYTGFIHNVLYENY
Sbjct: 301 KMSFWYGARSLREVFYQEDFDGLAAQNPNFEWHIALSEPLPEDNWTGYTGFIHNVLYENY 360

Query: 361 LKNHKAPEDCEFYMCGPPIMNSSVIKMLESLGVEPENILLDDFG 404
           LK HKAPEDCEFYMCGPPIMNSSVI MLE LGVE +NILLDDFG
Sbjct: 361 LKQHKAPEDCEFYMCGPPIMNSSVIAMLEGLGVERDNILLDDFG 404