Pairwise Alignments

Query, 405 a.a., NADH:ubiquinone oxidoreductase, Na translocating, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 418 a.a., Na(+)-translocating NADH-quinone reductase subunit F (RefSeq) from Shewanella amazonensis SB2B

 Score =  654 bits (1687), Expect = 0.0
 Identities = 315/406 (77%), Positives = 356/406 (87%), Gaps = 2/406 (0%)

Query: 1   MEMAIGIGMFTLVVCLLVIVILIAKKKLVTTGEITIGINDDAEKSIKVAAGDKLLGALAS 60
           +E+ +G+ MFT +V +LV+VIL AK KLV++G+ITIGIN D +K+IK AAG KLLGALA+
Sbjct: 12  LEVYLGVSMFTAIVLVLVLVILFAKSKLVSSGDITIGINHDPDKAIKTAAGGKLLGALAN 71

Query: 61  KNIFIPSACGGGGTCGQCRVKVKSGGGDILPTELGHITKKEAKEGCRLACQVAVKTDMEL 120
             IF+ SACGGGG+CGQCRV VKSGGGDILPTEL HI+K EAK+GCRLACQV VKTDME+
Sbjct: 72  SGIFVSSACGGGGSCGQCRVHVKSGGGDILPTELDHISKGEAKKGCRLACQVNVKTDMEI 131

Query: 121 ELEEEIFGVKKWQCEVISNDNKATFIKELLLKLPEGEDVHFKAGGYIQIEAPAHVVKYAD 180
           ELEEEIFG+KKW C VISNDNKATFIKEL L +P+GE V F+AGGYIQIEAPAH VKYAD
Sbjct: 132 ELEEEIFGIKKWDCTVISNDNKATFIKELKLAIPDGESVPFRAGGYIQIEAPAHHVKYAD 191

Query: 181 FDIPAKYRDDWEKYGLFDLVSTVNEDVLRAYSMANYPDEKGRIMLNVRIATPPSAN--VP 238
           FD+P KYR DWE +G F L S V+E V+RAYSMANYP+E G IMLNVRIATPP  N  +P
Sbjct: 192 FDVPEKYRGDWEHFGFFKLESKVDEPVIRAYSMANYPEEFGIIMLNVRIATPPPRNLSLP 251

Query: 239 PGKMSSYIFNLKAGDKVTISGPFGEFFVKDTDAEMVFIGGGAGMAPMRSHIFDQLKSKKT 298
            GKMSSYI++LKAGDKVTISGPFGEFF KDT+AEMVFIGGGAGMAPMRSHIFDQLK  K+
Sbjct: 252 CGKMSSYIWSLKAGDKVTISGPFGEFFAKDTNAEMVFIGGGAGMAPMRSHIFDQLKRLKS 311

Query: 299 KRKMSFWYGARSTREVFYQQDFDTLAAENDNFVWHVALSEPLPEDNWTGYTGFIHNVLYE 358
           KRKMSFWYGARS RE+FY +DFD LAAENDNFVWHVALS+P PEDNW GYTGFIHNVLYE
Sbjct: 312 KRKMSFWYGARSKREMFYVEDFDGLAAENDNFVWHVALSDPQPEDNWNGYTGFIHNVLYE 371

Query: 359 NYLKNHKAPEDCEFYMCGPPIMNSSVIKMLESLGVEPENILLDDFG 404
           NYLK+H+APEDCEFYMCGPP+MN++VI ML+ LGVE ENILLDDFG
Sbjct: 372 NYLKDHEAPEDCEFYMCGPPMMNAAVIAMLKDLGVEDENILLDDFG 417