Pairwise Alignments

Query, 405 a.a., NADH:ubiquinone oxidoreductase, Na translocating, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 408 a.a., Na(+)-translocating NADH-quinone reductase subunit F from Marinobacter adhaerens HP15

 Score =  569 bits (1466), Expect = e-167
 Identities = 267/404 (66%), Positives = 324/404 (80%), Gaps = 1/404 (0%)

Query: 2   EMAIGIGMFTLVVCLLVIVILIAKKKLVTTGEITIGINDDAEKSIKVAAGDKLLGALASK 61
           E+ +G+ MFT++V  LV VIL A+ +LV+TG++TI INDD E ++K  AG KLLG LA+ 
Sbjct: 4   EIILGVVMFTVIVLALVAVILAARSRLVSTGDVTIEINDDPEHTLKTEAGGKLLGTLANS 63

Query: 62  NIFIPSACGGGGTCGQCRVKVKSGGGDILPTELGHITKKEAKEGCRLACQVAVKTDMELE 121
            IF+ SACGGGGTC QC+ KV  GGG +LPTE  H T +E KEG RL+CQV VK DM++E
Sbjct: 64  GIFLSSACGGGGTCAQCKCKVLEGGGAMLPTEKTHFTNREEKEGWRLSCQVPVKQDMKVE 123

Query: 122 LEEEIFGVKKWQCEVISNDNKATFIKELLLKLPEGEDVHFKAGGYIQIEAPAHVVKYADF 181
           + EE FGVKKW+CEV+SN N ATFIKEL+LKLPEGE+V F+AGGY+Q+E P + + + DF
Sbjct: 124 VPEEFFGVKKWECEVVSNHNVATFIKELVLKLPEGEEVDFRAGGYVQLECPPYEIDFKDF 183

Query: 182 DIPAKYRDDWEKYGLFDLVSTVNEDVLRAYSMANYPDEKGRIMLNVRIAT-PPSANVPPG 240
           DI  ++ +DW+K+ ++   +   E+ +RAYSMANYP+EKG +  N+RIAT PP  +  PG
Sbjct: 184 DIEEEFHEDWDKHNIWRYKAVNKEETIRAYSMANYPEEKGVLKFNIRIATPPPGTDHNPG 243

Query: 241 KMSSYIFNLKAGDKVTISGPFGEFFVKDTDAEMVFIGGGAGMAPMRSHIFDQLKSKKTKR 300
            MSSY+FNLK GDKVT+ GPFGEFF K TDAEMVFIGGGAGMAPMRSHIFDQLK   +KR
Sbjct: 244 IMSSYVFNLKPGDKVTVMGPFGEFFAKKTDAEMVFIGGGAGMAPMRSHIFDQLKRLNSKR 303

Query: 301 KMSFWYGARSTREVFYQQDFDTLAAENDNFVWHVALSEPLPEDNWTGYTGFIHNVLYENY 360
           K+SFWYGARS RE+FY +DFD L  ENDNF WHVALS+ LPEDNW G TGFIHNVLYENY
Sbjct: 304 KISFWYGARSVREMFYVEDFDGLQEENDNFEWHVALSDALPEDNWEGPTGFIHNVLYENY 363

Query: 361 LKNHKAPEDCEFYMCGPPIMNSSVIKMLESLGVEPENILLDDFG 404
           LK+H APEDCE+YMCGPPIMN+S IKML+ LGVE ENI+LDDFG
Sbjct: 364 LKDHPAPEDCEYYMCGPPIMNASCIKMLKDLGVEDENIMLDDFG 407