Pairwise Alignments

Query, 405 a.a., NADH:ubiquinone oxidoreductase, Na translocating, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 352 a.a., 2Fe-2S iron-sulfur cluster-binding protein from Dyella japonica UNC79MFTsu3.2

 Score = 71.6 bits (174), Expect = 3e-17
 Identities = 80/362 (22%), Positives = 146/362 (40%), Gaps = 50/362 (13%)

Query: 48  VAAGDKLLGALASKNIFIPSACGGGGTCGQCRVKVKSGGGDILPTELGHITKKEAKEGCR 107
           V  G+ +L A     I +P +C  G  CG C+  +  G           ++     +   
Sbjct: 15  VEPGETVLEAAQRAGIALPYSCRAG-VCGSCKAILLEGQCQYPRNPPVALSGTSPAQHAV 73

Query: 108 LACQVAVKTDMELELEE--EIFGVKKWQCEVISNDNKATFIKELLLKLPEGEDVHFKAGG 165
           L CQ     D+ +   E   +  + + + EV+  +  A     + L+L            
Sbjct: 74  LLCQAVPCGDLLIAAREVTSVEDIARRRLEVVVTEKSALAPDVIGLRLE----------- 122

Query: 166 YIQIEAPAHVVKYADFDIPAKYRDDWEKYGLFDLVSTVNEDVLRAYSMANYPDEKGRIML 225
                 PA          P + R +W      D++  + +   R +S+A  P   G I +
Sbjct: 123 ------PA----------PGETRLNWLPGQYLDVL--LEDGRRRPFSIAGGPRADGSIEM 164

Query: 226 NVRIATPPSANVPPGKMSSYIFN-LKAGDKVTISGPFGEFFVK-DTDAEMVFIGGGAGMA 283
           +VR       +V  G  +S++ + L+ GD++ +  P G F  + D++  MVF+ GG G A
Sbjct: 165 HVR-------HVAGGGFTSWVADGLRVGDRLRLEAPLGTFVPREDSERPMVFMAGGTGFA 217

Query: 284 PMRSHIFDQLKSKKTKRKMSFWYGARSTREVFYQQDFDTLAAENDNFVWHVALSEPLPED 343
           P+++ I +   +  T+R +  ++GAR+  +++  +             +H  LS+P    
Sbjct: 218 PVKA-IVEHFLALGTRRPIEVYWGARNAADLYLLELARGWERSAHALRFHPVLSDPEQAA 276

Query: 344 NWTGYTGFIHNVLYENY--LKNHKAPEDCEFYMCGPPIMNSSVIKMLESLGVEPENILLD 401
                 G +H  + E+   L  H      + YM GPP M  +  K+    G+  E +  D
Sbjct: 277 ASGLRMGLVHEAVLEDLPDLSGH------DVYMSGPPAMIDAGRKLFLDAGLPEERLYYD 330

Query: 402 DF 403
            F
Sbjct: 331 SF 332