Pairwise Alignments

Query, 405 a.a., NADH:ubiquinone oxidoreductase, Na translocating, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 342 a.a., benzoate 1,2-dioxygenase electron transfer component BenC from Ralstonia sp. UNC404CL21Col

 Score = 97.1 bits (240), Expect = 7e-25
 Identities = 86/380 (22%), Positives = 151/380 (39%), Gaps = 64/380 (16%)

Query: 34  ITIGINDDAEKSIKVAAGDKLLGALASKNIFIPSACGGGGTCGQCRVKVKSGGGDILPTE 93
           + +   D   + I   AG+K+L A     I +P  C  G  CG C+ + +SG  D+    
Sbjct: 6   VALNFEDGVTRFIDCKAGEKVLDAAFRAKINLPMDCSDG-VCGTCKCRAESGSYDLGDDY 64

Query: 94  LGH-ITKKEAKEGCRLACQVAVKTDMELELEEEIFGVKKWQ---CEVISN---DNKATFI 146
           +   +++ E   G  L CQ+   +D  + +       K  Q      +SN    N A  +
Sbjct: 65  IDDALSEDEKNTGLVLTCQMVPHSDCVIAVPTSSTACKTGQSAFAATVSNVELHNDAAVV 124

Query: 147 KELLLKLPEGEDVHFKAGGYIQIEAPAHVVKYADFDIPAKYRDDWEKYGLFDLVSTVNED 206
            EL +   + E   F  G Y+ I  P                                  
Sbjct: 125 LELDV---DAEAPVFLPGQYVNIGVPG-------------------------------SG 150

Query: 207 VLRAYSMANYPDEKGRIMLNVRIATPPSANVPPGKMSSYIFNLKAGDKVTISGPFGEFFV 266
             R+YS ++ P E  +I   ++        +P G MS ++   + GDK+ + GP G F++
Sbjct: 151 QHRSYSFSSAPGES-KISFLIK-------KIPDGVMSRWLETAQPGDKLNLHGPLGSFYL 202

Query: 267 KDTDAEMVFIGGGAGMAPMRSHIFDQLKSKKTKRKMSFWYGARSTREVFYQQDFDTLAAE 326
           +D    ++F+ GG G+AP  S + + L    +++K+   YG     ++      D  AA 
Sbjct: 203 RDVQRPLLFLAGGTGLAPFLS-MLEVLARVNSQQKVHLIYGVTRDLDLVQVDAIDAYAAR 261

Query: 327 NDNFVWHVALSEPL---PEDNWTGYTGFIHNVLYENYLKNHKAPEDCEFYMCGPPIMNSS 383
             NF +   +++     P   W          + ++   +     D + Y+CGPP M  +
Sbjct: 262 LPNFSYATVVADAASNHPRKGW----------VTQHVPADALNDGDVDVYLCGPPPMVDA 311

Query: 384 VIKMLESLGVEPENILLDDF 403
           V K  +  GV+P +   + F
Sbjct: 312 VRKYFDDEGVKPSSFYYEKF 331