Pairwise Alignments

Query, 405 a.a., NADH:ubiquinone oxidoreductase, Na translocating, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 418 a.a., Na(+)-translocating NADH-quinone reductase subunit F (RefSeq) from Shewanella sp. ANA-3

 Score =  650 bits (1677), Expect = 0.0
 Identities = 310/406 (76%), Positives = 357/406 (87%), Gaps = 2/406 (0%)

Query: 1   MEMAIGIGMFTLVVCLLVIVILIAKKKLVTTGEITIGINDDAEKSIKVAAGDKLLGALAS 60
           +E+ +G+ MFT +V +LV+VIL AK KLV++G+ITIGINDD EK+I   AG KLLG LA+
Sbjct: 12  LEVYLGVSMFTAIVLVLVLVILFAKSKLVSSGDITIGINDDPEKAITTGAGGKLLGVLAN 71

Query: 61  KNIFIPSACGGGGTCGQCRVKVKSGGGDILPTELGHITKKEAKEGCRLACQVAVKTDMEL 120
             IF+ SACGGGG+CGQCRV VKSGGGDILPTEL HI+K +A++GCRL+CQV VK DME+
Sbjct: 72  SGIFVSSACGGGGSCGQCRVVVKSGGGDILPTELDHISKGDARKGCRLSCQVNVKNDMEI 131

Query: 121 ELEEEIFGVKKWQCEVISNDNKATFIKELLLKLPEGEDVHFKAGGYIQIEAPAHVVKYAD 180
           EL+EEIFG+KKW+C VISNDNKATFIKEL L++P+GE V F+AGGYIQIEAPAH VKYAD
Sbjct: 132 ELDEEIFGIKKWECTVISNDNKATFIKELKLQIPDGESVPFRAGGYIQIEAPAHHVKYAD 191

Query: 181 FDIPAKYRDDWEKYGLFDLVSTVNEDVLRAYSMANYPDEKGRIMLNVRIATPPSAN--VP 238
           FD+PAKYR DWE +G F L S V+E+ +RAYSMANYP+E G IMLNVRIATPP  N  +P
Sbjct: 192 FDVPAKYRGDWEHFGFFKLESKVDEETIRAYSMANYPEEFGIIMLNVRIATPPPRNLSLP 251

Query: 239 PGKMSSYIFNLKAGDKVTISGPFGEFFVKDTDAEMVFIGGGAGMAPMRSHIFDQLKSKKT 298
            GKMSSYI++LKAGDKVTISGPFGEFF KDTDAEMVFIGGGAGMAPMRSHIFDQLK  K+
Sbjct: 252 CGKMSSYIWSLKAGDKVTISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLKS 311

Query: 299 KRKMSFWYGARSTREVFYQQDFDTLAAENDNFVWHVALSEPLPEDNWTGYTGFIHNVLYE 358
           KRKMSFWYGARS RE+FY +DFD LAAENDNFVWHVALS+P PEDNW GYTGFIHNVLYE
Sbjct: 312 KRKMSFWYGARSKREMFYVEDFDGLAAENDNFVWHVALSDPQPEDNWDGYTGFIHNVLYE 371

Query: 359 NYLKNHKAPEDCEFYMCGPPIMNSSVIKMLESLGVEPENILLDDFG 404
           NYLK+H+APEDCEFYMCGPP+MN++VI ML++LGVE ENILLDDFG
Sbjct: 372 NYLKDHEAPEDCEFYMCGPPMMNAAVIGMLKNLGVEDENILLDDFG 417