Pairwise Alignments

Query, 202 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 198 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit E from Vibrio cholerae E7946 ATCC 55056

 Score =  285 bits (728), Expect = 5e-82
 Identities = 139/202 (68%), Positives = 169/202 (83%), Gaps = 4/202 (1%)

Query: 1   MEHYINLFIQATFLDNMALSFFLGMCTFLAVSKKVSTAFGLGVAVIVVMTLAVPLNQLIY 60
           MEHYI+L +++ F++NMALSFFLGMCTFLAVSKKV T+FGLG+AVIVV+T++VP+N L+Y
Sbjct: 1   MEHYISLLVKSIFIENMALSFFLGMCTFLAVSKKVKTSFGLGIAVIVVLTISVPVNNLVY 60

Query: 61  AKVLAPGALAWAGMPGIDLSYLQLITFIGVIAALVQILEMFLDKYIPSLYDSLGIFLPLL 120
             VL P AL    + G+DLS+L  ITFIGVIAALVQILEM LD++ P LY++LGIFLPL+
Sbjct: 61  NLVLKPDAL----VEGVDLSFLNFITFIGVIAALVQILEMILDRFFPPLYNALGIFLPLI 116

Query: 121 TVNCAIFAGVIFMANRDYNFAESAVFAMGSGTGWALAIVMLAGLRERMKFHAIPEGLQGI 180
           TVNCAIF GV FM  RDY+FAES V+  GSG GW LAIV LAG+RE+MK+  +P GL+G+
Sbjct: 117 TVNCAIFGGVSFMVQRDYSFAESVVYGFGSGVGWMLAIVALAGIREKMKYSDVPPGLRGL 176

Query: 181 GITFITTGLMALGFMSFSGISL 202
           GITFIT GLMALGFMSFSG+ L
Sbjct: 177 GITFITAGLMALGFMSFSGVQL 198