Pairwise Alignments

Query, 202 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 193 a.a., electron transport complex subunit A from Vibrio cholerae E7946 ATCC 55056

 Score =  152 bits (383), Expect = 5e-42
 Identities = 78/200 (39%), Positives = 118/200 (59%), Gaps = 10/200 (5%)

Query: 1   MEHYINLFIQATFLDNMALSFFLGMCTFLAVSKKVSTAFGLGVAVIVVMTLAVPLNQLIY 60
           M  Y+ L I    ++N  L  FLG+C F+ VSKK+ TA G+G+A   V+TLA     L+ 
Sbjct: 1   MTEYLLLLIGTVLVNNFVLVKFLGLCPFMGVSKKLETAIGMGLATTFVLTLASVCAYLVE 60

Query: 61  AKVLAPGALAWAGMPGIDLSYLQLITFIGVIAALVQILEMFLDKYIPSLYDSLGIFLPLL 120
           + VL P          + + YL+ ++FI VIA +VQ  EM + K  P+LY  LGIFLPL+
Sbjct: 61  SYVLRP----------LGIEYLRTMSFILVIAVVVQFTEMVVHKTSPTLYRLLGIFLPLI 110

Query: 121 TVNCAIFAGVIFMANRDYNFAESAVFAMGSGTGWALAIVMLAGLRERMKFHAIPEGLQGI 180
           T NCA+    +   N ++NF +S ++  G+  G++L +++ A +RER+    +P   +G 
Sbjct: 111 TTNCAVLGVALLNINENHNFIQSIIYGFGAAVGFSLVLILFASMRERIHVADVPAPFKGA 170

Query: 181 GITFITTGLMALGFMSFSGI 200
            I  IT GLM+L FM F+G+
Sbjct: 171 SIAMITAGLMSLAFMGFTGL 190