Pairwise Alignments

Query, 202 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 193 a.a., electron transport complex subunit A from Klebsiella michiganensis M5al

 Score =  150 bits (379), Expect = 1e-41
 Identities = 81/200 (40%), Positives = 116/200 (58%), Gaps = 10/200 (5%)

Query: 1   MEHYINLFIQATFLDNMALSFFLGMCTFLAVSKKVSTAFGLGVAVIVVMTLAVPLNQLIY 60
           M  Y+ LF+    ++N  L  FLG+C F+ VSKK+  A G+G+A   VMTLA     LI 
Sbjct: 1   MADYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLEAAMGMGLATTFVMTLASICAWLID 60

Query: 61  AKVLAPGALAWAGMPGIDLSYLQLITFIGVIAALVQILEMFLDKYIPSLYDSLGIFLPLL 120
             +L P          +DL YL+ + FI VIA +VQ  EM + K  P+LY  LGIFLPL+
Sbjct: 61  TWILIP----------LDLVYLRTLAFILVIAVVVQFTEMVVRKTSPALYRLLGIFLPLI 110

Query: 121 TVNCAIFAGVIFMANRDYNFAESAVFAMGSGTGWALAIVMLAGLRERMKFHAIPEGLQGI 180
           T NCA+    +   N  +NF +SA++   +  G++L +V+ A +RER+    +P   +G 
Sbjct: 111 TTNCAVLGVALLNINLGHNFLQSALYGFAAAVGFSLVMVLFASIRERLVVADVPAPFRGN 170

Query: 181 GITFITTGLMALGFMSFSGI 200
            I  +T GLM+L FM FSG+
Sbjct: 171 AIALVTAGLMSLAFMGFSGL 190