Pairwise Alignments

Query, 202 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 202 a.a., Na(+)-translocating NADH-quinone reductase subunit E (RefSeq) from Shewanella sp. ANA-3

 Score =  300 bits (768), Expect = 1e-86
 Identities = 144/202 (71%), Positives = 173/202 (85%)

Query: 1   MEHYINLFIQATFLDNMALSFFLGMCTFLAVSKKVSTAFGLGVAVIVVMTLAVPLNQLIY 60
           MEHYI+L I++ F++NMAL+FFLGMCTFLAVSKKV+TA GLG+AV+VV+T++VP NQ+IY
Sbjct: 1   MEHYISLLIRSVFIENMALAFFLGMCTFLAVSKKVTTAMGLGIAVVVVLTISVPANQVIY 60

Query: 61  AKVLAPGALAWAGMPGIDLSYLQLITFIGVIAALVQILEMFLDKYIPSLYDSLGIFLPLL 120
             +LAPGALAWAG P  DLS+L+ ITFIGVIAALVQILEM LDKY P LY++LGIFLPL+
Sbjct: 61  QGLLAPGALAWAGAPEADLSFLKFITFIGVIAALVQILEMALDKYFPPLYNALGIFLPLI 120

Query: 121 TVNCAIFAGVIFMANRDYNFAESAVFAMGSGTGWALAIVMLAGLRERMKFHAIPEGLQGI 180
           TVNCAIF  V FM  RDY   ES VF  GSG GWALAIV++AG+RE++K+  +P GL+G+
Sbjct: 121 TVNCAIFGAVSFMVERDYKLGESVVFGFGSGVGWALAIVLMAGIREKLKYADVPNGLRGL 180

Query: 181 GITFITTGLMALGFMSFSGISL 202
           GITFIT GLMALGFMSFSG+SL
Sbjct: 181 GITFITAGLMALGFMSFSGVSL 202