Pairwise Alignments

Query, 206 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 194 a.a., electron transport complex, RnfABCDGE type, A subunit from Pseudomonas stutzeri RCH2

 Score = 72.4 bits (176), Expect = 5e-18
 Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 7/158 (4%)

Query: 10  MLAGPVFANNPVAMQVLGVCSALAVSNSMQTAVVMTLAVTFVLVFSNLIISAIRNFIPNS 69
           ++   +  NN V +Q LG+C  + VS  ++TA+ ++LA TFVL  + +    ++ ++   
Sbjct: 7   IMVSAILVNNFVLVQFLGLCPFMGVSKKIETAIGLSLATTFVLTLAAMCSYLVQQYVLKP 66

Query: 70  -----VRIIAQMTVIASLVIIVDMVLQDVAYELSKQLSVFVGLIITNCIIMGRA--EAFA 122
                +R I+ + VIA  V   +MV+   +  L + L +F+ LI TNCI++G A   A  
Sbjct: 67  LDLEFLRTISFILVIAVTVQFTEMVVNKTSPLLYRVLGIFLPLITTNCIVLGVALLNANK 126

Query: 123 MKYPPHLAVVDAVGNAAGYGLVLISVAFVRELLGTGNL 160
            ++    A V+      G+ LVL+  A +RE +   ++
Sbjct: 127 AEFTFLTATVNGFAAGLGFSLVLVLFAAMRERIAIADV 164