Pairwise Alignments

Query, 206 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 228 a.a., Ion-translocating oxidoreductase complex subunit E from Enterobacter sp. TBS_079

 Score =  125 bits (315), Expect = 5e-34
 Identities = 74/211 (35%), Positives = 120/211 (56%), Gaps = 16/211 (7%)

Query: 7   MRDMLAGPVFANNPVAMQVLGVCSALAVSNSMQTAVVMTLAVTFVLVFSNLIISAIRNFI 66
           +++++   ++ NN   +Q+LG+C  LAV+++   A+ + LA T VL  +NL ISA+R + 
Sbjct: 4   VKEVIVQGLWKNNSALVQLLGMCPLLAVTSTATNALGLGLATTLVLTLTNLSISALRRWT 63

Query: 67  PNSVRIIAQMTVIASLVIIVDMVLQDVAYELSKQLSVFVGLIITNCIIMGRAEAFAMKYP 126
           P+ +RI   + +IAS+V IV M++   A+ L + L +F+ LI+TNCI++GRAEAFA+K  
Sbjct: 64  PSEIRIPIYVMIIASVVSIVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAVKNS 123

Query: 127 PHLAVVDAVGNAAGYGLVLISVAFVRELLGTGNLF-GHSVLTTVENGGWY---------- 175
           P ++ +D      G    +  +  +RE+LG G LF G   L     GGW           
Sbjct: 124 PAMSALDGFSIGMGATGAMFVLGSMREILGNGTLFDGADALL----GGWAKALRIEVFHT 179

Query: 176 -LPNEMFKLPPSAFFLIGLLIWSINVIQRKR 205
             P  +  LPP AF  +G+++    +I  KR
Sbjct: 180 DTPFLLAMLPPGAFIGLGMMLAIKYLIDEKR 210