Pairwise Alignments

Query, 206 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 190 a.a., Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 85.1 bits (209), Expect = 8e-22
 Identities = 54/145 (37%), Positives = 83/145 (57%), Gaps = 6/145 (4%)

Query: 15  VFANNPVAMQVLGVCSALAVSNSMQTAVVMTLAVTFVLVFSNLIISAIRNFIPNS----- 69
           +F NN V  Q LG+C  L VS  ++TA+ M+ AV FVL  + ++   I+ F+ ++     
Sbjct: 11  IFVNNIVLSQFLGICPFLGVSKKVETAMGMSAAVAFVLTIATIVTFLIQKFVLDAFGLGY 70

Query: 70  VRIIAQMTVIASLVIIVDMVLQDVAYELSKQLSVFVGLIITNCIIMGRAEAFAMK-YPPH 128
           ++ I  + VIA LV +V+++L+ V+  L + L VF+ LI TNC I+G A     K +   
Sbjct: 71  LQTITFILVIAGLVQMVEIILKKVSPSLYQALGVFLPLITTNCCILGVAILVIQKDFDLL 130

Query: 129 LAVVDAVGNAAGYGLVLISVAFVRE 153
             VV A   A G+GL L+  A +RE
Sbjct: 131 TGVVYAFSTALGFGLALVLFAGLRE 155