Pairwise Alignments

Query, 206 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 194 a.a., Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfE (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  131 bits (330), Expect = 7e-36
 Identities = 73/189 (38%), Positives = 113/189 (59%), Gaps = 6/189 (3%)

Query: 15  VFANNPVAMQVLGVCSALAVSNSMQTAVVMTLAVTFVLVFSNLIISAIRNFIPNSVRIIA 74
           +   NP+ + +LG+C  L  ++S    + M LA  FVL+ SN++IS+I+N IP+ VRI +
Sbjct: 11  IIKENPIFVLLLGMCPTLGTTSSAINGMGMGLATMFVLICSNVVISSIKNLIPDMVRIPS 70

Query: 75  QMTVIASLVIIVDMVLQDVAYELSKQLSVFVGLIITNCIIMGRAEAFAMKYPPHLAVVDA 134
            + VIAS V ++ M++Q    +L   L +F+ LI+ NCI++GRAEAFA K  P  ++ D 
Sbjct: 71  FIVVIASFVTLLQMIMQAYVPDLYATLGLFIPLIVVNCIVLGRAEAFAAKNNPLASMFDG 130

Query: 135 VGNAAGYGLVLISVAFVRELLGTGNLFGHSVLTTVENGGWYLPNEMFKLPPSAFFLIGLL 194
           +G   G+ + L  +  VRE LGTG +F  ++L   E  G  +    F L P AF  +G L
Sbjct: 131 IGMGFGFTIALTLLGAVREFLGTGKIFNLTILP--EEYGMLI----FVLAPGAFIALGYL 184

Query: 195 IWSINVIQR 203
           I  IN +++
Sbjct: 185 IAIINSLKK 193