Pairwise Alignments

Query, 264 a.a., NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 262 a.a., Na(+)-translocating NADH-quinone reductase subunit C (RefSeq) from Shewanella sp. ANA-3

 Score =  194 bits (492), Expect = 2e-54
 Identities = 98/257 (38%), Positives = 154/257 (59%), Gaps = 5/257 (1%)

Query: 1   MVFKKDTVVGTMIFTITLCLLCSFMITGTAGVLKERKLAKKRDELQRYVLMAA---DVNL 57
           M   KD+   T+   + LCL+C+  ++  A +L+  +   K  + Q+Y+L AA   D   
Sbjct: 1   MASNKDSFGRTLFIVVGLCLICAIFVSTAAVLLRPTQAENKLLDKQKYILEAAGLIDTKA 60

Query: 58  GQGNEFR--DIFAKSVKPLLINLDTGKVDSDANVLDFDERMAAINPETSSTPKKDIAKIK 115
           G+  + +  D + K ++  L+NL TG      +   FD+R A+ + +TS  P+ DIA +K
Sbjct: 61  GKVTKAQILDTYGKHIEAKLVNLKTGDWVEGVDANTFDQRKASRDVKTSFVPENDIASVK 120

Query: 116 TRANDARVFKVFDDSGKLSSVVVPFYGKGLWSMIYGYVAVEPDFNTIKGVVVYEHGETPG 175
             A DA V+ V D+ GKL+SV++P +G GLWS +Y ++A++ D NTI+ +V YE GETPG
Sbjct: 121 RVAEDAVVYLVRDEQGKLTSVILPVHGYGLWSTMYAFLALDADLNTIQSLVYYEQGETPG 180

Query: 176 IGDFVTDPHWLSLWKGKQLFDDKGKFAMRLVKGGVKEGDIHGVDAVSGATMTGRGVQRAM 235
           +G  V +  W + W GK+LFD++G  A+ + K        +GVDA+SGAT+T  GVQ ++
Sbjct: 181 LGGEVQNAQWKAKWHGKKLFDEQGNIAISVTKNPAVASTEYGVDALSGATLTSNGVQHSL 240

Query: 236 EFWFGVEGFQTFFNQLK 252
            FW G EGF +F  + +
Sbjct: 241 TFWLGKEGFASFIEKAR 257