Pairwise Alignments

Query, 456 a.a., NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 449 a.a., Na+-translocating NADH-quinone reductase subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  239 bits (610), Expect = 1e-67
 Identities = 152/453 (33%), Positives = 238/453 (52%), Gaps = 14/453 (3%)

Query: 8   VITIKKGLDLPISGEPRQIIEPGNRPSQVALLGEEYVGLKPTMLVEVGDKVKKGQPLFED 67
           VI ++KGLD+ + G+  +       P   AL+ +++ G+ P ++V+  + V  G PLF D
Sbjct: 4   VIKLRKGLDINLKGKAAETYTTVKEPGFYALVPDDFPGVTPKVVVKEQEYVMAGGPLFID 63

Query: 68  KKTKGVFFTAPASGEIVAINRGERRVLQSVVIRCNGLDADEQIRFDIHADLQSLSAQVVQ 127
           K    V F +P SG + ++ RG RR + ++V+        E+       ++ S+ A  V+
Sbjct: 64  KYHPEVKFVSPVSGVVTSVERGARRKVLNIVVEAAAEQDYEEFG---KKNVSSMDADAVK 120

Query: 128 AQLVNSGLWTALRTRPFSRVPALDSKPAGIFVTAMDTNPLAADPRLIIAEQSDAFKAGLA 187
           + L+ +GL+  ++ RP+  +      P GIFV+A DTNPLA D    +  +   F+ GL 
Sbjct: 121 SALLEAGLFAFIKQRPYDIIADPTVTPKGIFVSAFDTNPLAPDFEFALKGEEANFQTGLD 180

Query: 188 VLSHLTDGKVYLC---QDKGEALVGADLPKVEVRRFTGVHPAGLAGTHIHFTLPVSIERQ 244
            L+ +   K YL    + K  AL  A    V +  F G +PAG  G  I+   PVS    
Sbjct: 181 ALAKMA--KTYLSISVKQKAAALTQAK--NVTITAFDGPNPAGNVGVQINHLDPVSKGET 236

Query: 245 VWHIGYQDVIAYGKLFQTGELYTDRVVALGGPSVLNPRLLRTQLGAELSALVADEVKSGN 304
           VW I  Q VI  G+LF TG +   R VA+ G  VL P   + Q+GA L+ + A  V +  
Sbjct: 237 VWTIDPQAVIFIGRLFNTGRVNFTRTVAVTGSEVLKPAYCKLQVGALLTNVFAGNVTTDK 296

Query: 305 N-RVVSGSVLSGHTAQGVHDFLGRFHNQISVLAE-DAQHQVLPWVRGGSDKFSITRAVTS 362
           + R +SG+VLSG      + FLG FH+Q++V+ E D  H++  W+    ++FS   +  S
Sbjct: 297 DLRYISGNVLSGKQVSP-NGFLGAFHSQLTVIPEGDDVHEMFGWIMPRFNQFSANHSYFS 355

Query: 363 RLFGLTKSFEFTTHQGGSQRAMMAFGQLDRVMPLDILPTLLVRDLVVRDTDEAQALGALE 422
            L G  K +       G +R M+  G+ D+V P+DI+P  L++ ++  D D  +ALG  E
Sbjct: 356 WLMG-KKEYTLDARIKGGERHMIMSGEYDKVFPMDIMPEYLIKAIIAGDIDRMEALGIYE 414

Query: 423 LDEEDLALCTFVCPGKYDFGKELRACLDVIERE 455
           +  ED ALC FVC  K +  + +R  LD++  E
Sbjct: 415 VAPEDFALCEFVCSSKMELQRIVRVGLDMLRAE 447