Pairwise Alignments

Query, 568 a.a., amidase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 493 a.a., aspartyl/glutamyl-tRNA amidotransferase subunit A from Sinorhizobium meliloti 1021

 Score =  109 bits (273), Expect = 2e-28
 Identities = 101/348 (29%), Positives = 152/348 (43%), Gaps = 48/348 (13%)

Query: 1   MFEVTEVSIAELRAALESGRTTVVELVKSYLARVAAYDGPATETKLNALVVHNPDALKE- 59
           M ++T ++IAE RA L +   T VEL  +YL  + A    A ET +NA V   P+  +E 
Sbjct: 1   MTDLTSLTIAEARAKLSAKEITAVELTDAYLGAIEA----ANET-INAYVAVTPEKAREM 55

Query: 60  AEASDARRARGETLSPLDGIPYTAKDSYLVKGLTAASGSPAFKDLVAQYDAFAVERLRAA 119
           A+ASDAR A G   + L+GIP   KD +  +G+   + S        +Y++   + L   
Sbjct: 56  AKASDARIAAGNAAA-LEGIPLGIKDLFGTEGIHTQACSHILDGFEPRYESTVTQNLWND 114

Query: 120 GAICLGKTNMPPMANGGM-QRGHYGRAESPYNAEYLTAPFA-SGSSNGAGTGTAASYSAF 177
           GA+ LGK NM   A G   +  +YG  ++P+ A+         GSS G+    AA   A 
Sbjct: 115 GAVMLGKLNMDEFAMGSSNETSYYGPVKNPWRAKGSNLDLVPGGSSGGSAAAVAARLCAG 174

Query: 178 GLAEETWSSGRGPASNNGLCAYTPSRGVISVRGNWPLTPTMDVVVPYTRTMADMLEVLDV 237
             A +T  S R PA+  G     P+ G  S  G      ++D   P  R + D   +L  
Sbjct: 175 ATATDTGGSIRQPAAFTGTVGIKPTYGRCSRWGVVAFASSLDQAGPIARDVRDAAILLKS 234

Query: 238 IVADDP--ITRGDLWRLQPWVQIPKASTVRPESYLALAASADTLKGKRFGVPRMYINKDE 295
           + + DP   T  DL        +P             AA   ++KG R G+P+ Y     
Sbjct: 235 MASIDPKDTTSVDL-------PVPDYE----------AAIGQSIKGMRIGIPKEY----R 273

Query: 296 LAGTSENPGIGGPTGQRIHTRQSVIDLWEAARKALEAAGAEVIEVDFP 343
           + G  E+                +  LW+     L  AGAE++++  P
Sbjct: 274 VDGMPED----------------IEALWQQGIAWLRDAGAEIVDISLP 305



 Score = 35.4 bits (80), Expect = 5e-06
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 6/91 (6%)

Query: 467 LDAVLFPTVADVGPADAHVNPASADIA-WSNGVWVANGNLAIRHLGVPTVTVPMGVMADI 525
           +DA+L P         A  + AS  +  + N ++    N+A    G+P + VP G+    
Sbjct: 401 VDAILTPATPSSAFGIADEDLASDPVKMYLNDIFTVTVNMA----GLPGIAVPGGLDRK- 455

Query: 526 GMPVGLTFAGRAYDDNNLLKFAGAFESTGNR 556
           G+P+GL   G+ +++  L K A   E    R
Sbjct: 456 GLPLGLQLIGKPFEEETLFKTAHVIEQAAGR 486