Pairwise Alignments

Query, 637 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 636 a.a., ATPase components of ABC transporters with duplicated ATPase domains from Pseudomonas stutzeri RCH2

 Score =  684 bits (1766), Expect = 0.0
 Identities = 343/634 (54%), Positives = 454/634 (71%), Gaps = 2/634 (0%)

Query: 1   MISINQAQLIRGSKTLLDEASLTIYPGHKVGLVGANGTGKSSLLALIMGHLSLDKGEFSM 60
           MI +    L RG + LL+ A LT++PG K GL+GANG GKS+L AL+ G +  D G+  +
Sbjct: 1   MIRLQNLTLQRGPQRLLEGAELTLHPGQKAGLIGANGAGKSTLFALLRGEMVPDGGDCQL 60

Query: 61  PSGWQIASVAQETPALDMSALEYVLDGDKEYRQLEADLHIAQEHNDGHAIATLHGKIDAI 120
           P  W+IA + QE   LD  A++YVLDGD E R+++ +L  A++ +DG+A+A LH ++D +
Sbjct: 61  PPDWRIAHMRQEIDTLDRLAVDYVLDGDVELRRVQRELAAAEQAHDGNALARLHTELDNL 120

Query: 121 GGYAIRARAGALLAGLGFSEAEQNNPVKSFSGGWRMRLNLAQALLCRSDLLLLDEPTNHL 180
            GY+  ARA  LLAGLGF+  +   PV SFSGGWRMRLNLAQAL+C SDLLLLDEPTNHL
Sbjct: 121 DGYSADARARKLLAGLGFANEQMTLPVSSFSGGWRMRLNLAQALMCPSDLLLLDEPTNHL 180

Query: 181 DLDTMYWLEGWIKSYQGTLILISHDRDFIDEIVDEIVHVENQKLNFYKGNYSAFERIRAE 240
           DLD + WLE W+K Y GTL+LISHDRDF+D +VD ++H+E +KL  Y+G YSAFER RAE
Sbjct: 181 DLDAILWLEDWLKGYPGTLLLISHDRDFLDAVVDHVIHLEQRKLTLYRGGYSAFERTRAE 240

Query: 241 RMAQQQVAFERQQKERAHMQSFVDRFRYKASKAKQAQSRLKALERMTELLPSQADSPFYM 300
           R+AQQQ AFE+QQ +RAHM+S++ RF+ +A+KA+QAQSR+KALER+ EL P+  DSPF  
Sbjct: 241 RLAQQQQAFEKQQAQRAHMESYIRRFKAQATKARQAQSRIKALERLEELAPAHVDSPFDF 300

Query: 301 EFRPPEALPNPLIKMEQVAVGYGDKQILSKVHLNLVPGARIGLLGRNGAGKSTLIKLLSG 360
            FR  + + +PL+ + +  +GYG+K +L KV L LVPGARIGLLG NGAGKSTLIK L+ 
Sbjct: 301 RFREADKVSSPLLDLAEARLGYGEKVVLEKVKLQLVPGARIGLLGPNGAGKSTLIKTLAA 360

Query: 361 QLSPMTGLYEPNPGLNIGYFAQHQIEFLRLDDTPLQHLVRLAPNAREQELRNFLGGFGFN 420
           +L+P++G  +    L +GYFAQHQ++ L    +PL HL R+AP+ REQ LR+FLGGF F 
Sbjct: 361 ELTPLSGRLQRGENLAVGYFAQHQLDSLDPKASPLLHLQRIAPSEREQTLRDFLGGFDFR 420

Query: 421 GDMALSPVRPFSGGEKARLVLALLVWQRPNLLLLDEPTNHLDLEMRHALTMALQTFEGAM 480
           G     PV  FSGGEKARL LAL+ W +PNLLLLDEPTNHLDLEMR ALTMALQ FEGA+
Sbjct: 421 GVRCDEPVLNFSGGEKARLALALIAWGKPNLLLLDEPTNHLDLEMRLALTMALQDFEGAV 480

Query: 481 VIVSHDRHLLRLTCSDYYLVDQGEVQAFDGDLDDYHQWLLDAAKAASANQAANSDDTKPA 540
           ++VSHDRHLL+ T  ++ LV  G+VQ+FDGDL+DY +WL+D    A     A+ +     
Sbjct: 481 LVVSHDRHLLKSTTDEFLLVADGQVQSFDGDLEDYARWLVD--YRARQQPVASGEPAADK 538

Query: 541 VDKKQQKRLEAELRQKVSPLKRKQAKLEIDQQKLSERLAELEHLLADGELYDQDNKAKLT 600
            DK+ Q++  A LRQ+++P KR+  KLE D   + E+LAELE  L D  LY+   K +L 
Sbjct: 539 TDKRAQRQAAAALRQQLAPHKRQADKLEKDLATVHEKLAELETSLGDSALYEVARKDELR 598

Query: 601 SVLSERTSLTQTLEESEMQWLELQEEIDTMELEL 634
            +L+++  L     E E  WLE  E ++ ++ +L
Sbjct: 599 QLLAKQAELKVREGELEEAWLEALETLEALQAQL 632