Pairwise Alignments

Query, 637 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 638 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  779 bits (2012), Expect = 0.0
 Identities = 385/638 (60%), Positives = 495/638 (77%), Gaps = 2/638 (0%)

Query: 1   MISINQAQLIRGSKTLLDEASLTIYPGHKVGLVGANGTGKSSLLALIMGHLSLDKGEFSM 60
           MI+ ++ QL+RG K LL++AS TI+PG KVGLVG NG GKS+L AL+   L++D G FS 
Sbjct: 1   MITFSEIQLLRGGKPLLEQASATIHPGDKVGLVGKNGCGKSTLFALLKDELTIDAGSFSK 60

Query: 61  PSGWQIASVAQETPALDMSALEYVLDGDKEYRQLEADLHIAQEHNDGHAIATLHGKIDAI 120
           P+ W++A VAQETPALD +ALEYV+DGD+EYR+LE  L  A+  ++G  +A LHGKI+ +
Sbjct: 61  PAHWELAWVAQETPALDRTALEYVIDGDREYRELERQLMDAEAADNGTKVADLHGKIEMV 120

Query: 121 GGYAIRARAGALLAGLGFSEAEQNNPVKSFSGGWRMRLNLAQALLCRSDLLLLDEPTNHL 180
           GGY+IRARA  LL GLGF++ + +  +  FSGGWRMRLNLAQAL+CRSDLLLLDEPTNHL
Sbjct: 121 GGYSIRARASELLDGLGFTQEQMSWSLTQFSGGWRMRLNLAQALICRSDLLLLDEPTNHL 180

Query: 181 DLDTMYWLEGWIKSYQGTLILISHDRDFIDEIVDEIVHVENQKLNFYKGNYSAFERIRAE 240
           DLD + WLE W++SY GTLILISHDRDF+D IV+ IVH+ENQ LN Y GNYS+FE  RA+
Sbjct: 181 DLDAVMWLERWLQSYPGTLILISHDRDFLDPIVNRIVHIENQTLNEYTGNYSSFETQRAQ 240

Query: 241 RMAQQQVAFERQQKERAHMQSFVDRFRYKASKAKQAQSRLKALERMTELLPSQADSPFYM 300
           +M QQQ  +++QQK+ AHMQS++DRFRYKASKA+QAQSR+KALERM ++LP+Q D+PF  
Sbjct: 241 KMLQQQAIYQKQQKQMAHMQSYIDRFRYKASKARQAQSRIKALERMEKVLPAQFDNPFSF 300

Query: 301 EFRPPEALPNPLIKMEQVAVGYGDKQILSKVHLNLVPGARIGLLGRNGAGKSTLIKLLSG 360
           EFR P ALPNP++ M+QVA GYGD  IL K+ LNLVPG+RIGLLGRNGAGKSTLIKLLSG
Sbjct: 301 EFREPAALPNPILMMDQVAAGYGDHLILEKIRLNLVPGSRIGLLGRNGAGKSTLIKLLSG 360

Query: 361 QLSPMTGLYEPNPGLNIGYFAQHQIEFLRLDDTPLQHLVRLAPNAREQELRNFLGGFGFN 420
           +L P +G    + G+ IGYFAQHQ+E L  ++TPLQH++++AP+  E ELRN+LG FGF+
Sbjct: 361 ELKPQSGDCTYSQGVKIGYFAQHQLETLHPEETPLQHMMQIAPDKNELELRNYLGSFGFH 420

Query: 421 GDMALSPVRPFSGGEKARLVLALLVWQRPNLLLLDEPTNHLDLEMRHALTMALQTFEGAM 480
           G+ AL  V PFSGGEKARLVLAL+VWQ+PNLLLLDEPTNHLDL+MR ALT+ALQ++EGAM
Sbjct: 421 GEKALEKVAPFSGGEKARLVLALIVWQKPNLLLLDEPTNHLDLDMRQALTLALQSYEGAM 480

Query: 481 VIVSHDRHLLRLTCSDYYLVDQGEVQAFDGDLDDYHQWLLDAAKA-ASANQAAN-SDDTK 538
           VIVSHDR+LLR T  D YLV   +V  FDGDL+DY++WL D  KA     Q  N ++   
Sbjct: 481 VIVSHDRYLLRATTDDLYLVHDHQVGPFDGDLNDYYKWLTDQQKAERKETQPTNTANSAN 540

Query: 539 PAVDKKQQKRLEAELRQKVSPLKRKQAKLEIDQQKLSERLAELEHLLADGELYDQDNKAK 598
            A  KK+QKR EA+ R+  +P+++K  +LE    KL+  ++E+E  L+D  LY+  NKA 
Sbjct: 541 SAAAKKEQKRREADFRKLTAPIRKKLTQLEEKLDKLNHVVSEMEAQLSDTSLYEAQNKAT 600

Query: 599 LTSVLSERTSLTQTLEESEMQWLELQEEIDTMELELMG 636
           LT VL+++ +    LE+ E++W+  QE ++ ME +  G
Sbjct: 601 LTEVLAKQAAAKSELEQVELEWMAEQETLEEMERKFNG 638