Pairwise Alignments

Query, 637 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 629 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  459 bits (1182), Expect = e-133
 Identities = 259/630 (41%), Positives = 371/630 (58%), Gaps = 8/630 (1%)

Query: 1   MISINQAQLIRGSKTLLDEASLTIYPGHKVGLVGANGTGKSSLLALIMGHLSLDKGEFSM 60
           MI I+        + L+D AS+T+  G K GLVG NG GKS+L  +I G L+ + G  S+
Sbjct: 1   MIQISGLSARIAGRLLIDNASVTLPAGTKAGLVGRNGAGKSTLFRVITGELAAEAGSVSL 60

Query: 61  PSGWQIASVAQETPALDMSALEYVLDGDKEYRQLEADLHIAQEHNDGHAIATLHGKIDAI 120
           P   +I  VAQE P  +   +E VL  D+E   L A+   A    D H IA +  ++  I
Sbjct: 61  PKNARIGQVAQEAPGTEEPLIEIVLKADRERTALIAESETAV---DPHRIAEIQTRLADI 117

Query: 121 GGYAIRARAGALLAGLGFSEAEQNNPVKSFSGGWRMRLNLAQALLCRSDLLLLDEPTNHL 180
           G ++  ARA ++LAGLGF    Q  P  SFSGGWRMR+ LA  L    DLLLLDEPTN+L
Sbjct: 118 GAHSAEARAASILAGLGFDHEAQKRPASSFSGGWRMRVALAAVLFSEPDLLLLDEPTNYL 177

Query: 181 DLDTMYWLEGWIKSYQGTLILISHDRDFIDEIVDEIVHVENQKLNFYKGNYSAFERIRAE 240
           DL+   WLE +I+ Y  T+I+ISHDRD ++  V+ IVH++ +KL FY+G+Y  FER +AE
Sbjct: 178 DLEGTLWLEDYIRRYPHTVIIISHDRDLLNTAVNAIVHLDQKKLTFYRGSYDQFERQKAE 237

Query: 241 RMAQQQVAFERQQKERAHMQSFVDRFRYKASKAKQAQSRLKALERMTELLPSQADSPFYM 300
               Q  A  + +  R H+QSF+DRF+ KASKA+QAQSR+KALERM  +     D     
Sbjct: 238 ADELQMKAKAKNEAARKHLQSFIDRFKAKASKARQAQSRIKALERMGTVAAVIEDHVQGF 297

Query: 301 EFRPPE-ALPNPLIKMEQVAVGY-GDKQILSKVHLNLVPGARIGLLGRNGAGKSTLIKLL 358
            F  PE  + +P++ ++  AVGY   K IL +++L +    RI LLG NG GKST  K +
Sbjct: 298 TFPDPEKQVASPIVAIQGGAVGYEPGKPILKRLNLRIDADDRIALLGSNGNGKSTFAKFI 357

Query: 359 SGQLSPMTGLYEPNPGLNIGYFAQHQIEFLRLDDTPLQHLVRLAPNAREQELRNFLGGFG 418
           +G+L   +G     PGL +G+FAQHQ++ L    + ++H+ R  P A E ++R+ +   G
Sbjct: 358 AGRLRAESGEVRIAPGLKVGFFAQHQLDDLVPTQSAVEHVRRRMPEAPEAKVRSRVAQMG 417

Query: 419 FNGDMALSPVRPFSGGEKARLVLALLVWQRPNLLLLDEPTNHLDLEMRHALTMALQTFEG 478
              +   +  +  SGGEKARL++ L  ++ P+LL+LDEPTNHLD++ R+AL  AL  F G
Sbjct: 418 LATEKMDTAAKDLSGGEKARLLMGLAAFEAPSLLILDEPTNHLDIDSRNALIAALNDFSG 477

Query: 479 AMVIVSHDRHLLRLTCSDYYLVDQGEVQAFDGDLDDYHQWLLDAAKAASANQAANSDDTK 538
           A++++SHDRHL+  T    +LV  G V  +DGDL+DY   ++   K        N  D  
Sbjct: 478 AVILISHDRHLIEATADRLWLVRDGTVANYDGDLEDYRGLIVGGPKPKDDKPRVNGSD-- 535

Query: 539 PAVDKKQQKRLEAELRQKVSPLKRKQAKLEIDQQKLSERLAELEHLLADGELYDQDNKAK 598
            A+ K  Q++  A+ R  ++PL++K  ++E    KL + +  L+  LAD  LY++   AK
Sbjct: 536 EALSKADQRKANADRRASLAPLRKKINEIESLTGKLEKVIQALDAELADPALYEK-APAK 594

Query: 599 LTSVLSERTSLTQTLEESEMQWLELQEEID 628
                 ER    + L  +E QWLEL  E +
Sbjct: 595 AAQRAKERADAVEKLAAAEEQWLELSAEYE 624