Pairwise Alignments

Query, 637 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 617 a.a., ABC transporter, ATP-binding protein from Phaeobacter inhibens DSM 17395

 Score =  474 bits (1221), Expect = e-138
 Identities = 271/631 (42%), Positives = 367/631 (58%), Gaps = 16/631 (2%)

Query: 1   MISINQAQLIRGSKTLLDEASLTIYPGHKVGLVGANGTGKSSLLALIMGHLSLDKGEFSM 60
           M+ I+        + L D AS TI  GHKVGLVG NGTGK++L  LI   LSL+ G  S+
Sbjct: 1   MLRISDISYAVEGRLLFDGASATIPTGHKVGLVGRNGTGKTTLFRLIRNELSLESGSISL 60

Query: 61  PSGWQIASVAQETPALDMSALEYVLDGDKEYRQLEADLHIAQEHNDGHAIATLHGKIDAI 120
           PS  +I  VAQE PA D+  +E VL  D E  +L A+   AQ+ N    IA +  ++  I
Sbjct: 61  PSRSRIGGVAQEAPASDVPLIETVLAADTERAELLAESETAQDPN---RIAEIQTRLSDI 117

Query: 121 GGYAIRARAGALLAGLGFSEAEQNNPVKSFSGGWRMRLNLAQALLCRSDLLLLDEPTNHL 180
             ++  ARA ++L GLGF    Q  P   FSGGWRMR+ LA  L  + DLLLLDEPTN+L
Sbjct: 118 DAWSAEARAASILKGLGFDYEAQQRPCSDFSGGWRMRVALAAVLFSQPDLLLLDEPTNYL 177

Query: 181 DLDTMYWLEGWIKSYQGTLILISHDRDFIDEIVDEIVHVENQKLNFYKGNYSAFERIRAE 240
           DL+   WLE ++  Y  T+I+ISHDR+ ++  V+ I+H+E   L +Y GNY  F R RA 
Sbjct: 178 DLEGALWLEAYLVKYPHTVIIISHDRELLNRSVNGILHLEELGLTYYSGNYDQFARQRAA 237

Query: 241 RMAQQQVAFERQQKERAHMQSFVDRFRYKASKAKQAQSRLKALERMTELLPSQADSPFYM 300
             A Q    ++Q   RAH+Q+FVDRF+ KASKAKQAQSR+K LE+M  +   +  +    
Sbjct: 238 NRANQAAQAKKQDARRAHLQAFVDRFKAKASKAKQAQSRVKMLEKMETIRAPEDAARTVF 297

Query: 301 EFRPPEALPNPLIKMEQVAVGYGDKQILSKVHLNLVPGARIGLLGRNGAGKSTLIKLLSG 360
            F  PE L  P+I  E  +VGY    ILS++ L +    RI LLG+NG GKSTL K+LSG
Sbjct: 298 TFPEPEELSPPIIATEGASVGYDGTTILSRLDLRIDQDDRIALLGKNGEGKSTLSKMLSG 357

Query: 361 QLSPMTGLYEPNPGLNIGYFAQHQIEFLRLDDTPLQHLVRLAPNAREQELRNFLGGFGFN 420
           +L  MTG    +  L IG+FAQHQ++ L +D+TPLQHL R  PN  +  LR  L GFG  
Sbjct: 358 RLGVMTGKMTQSSKLRIGFFAQHQVDELHIDETPLQHLQRERPNEGQARLRARLAGFGLG 417

Query: 421 GDMALSPVRPFSGGEKARLVLALLVWQRPNLLLLDEPTNHLDLEMRHALTMALQTFEGAM 480
            D A + V   SGG+KARL L L     P+LL+LDEPTNHLD+E R AL  AL  + GA+
Sbjct: 418 SDQADTEVGRLSGGQKARLSLLLATLPAPHLLILDEPTNHLDIESREALVEALTAYSGAV 477

Query: 481 VIVSHDRHLLRLTCSDYYLVDQGEVQAFDGDLDDYHQWLLDAAKAASANQAANSDDTKPA 540
           ++VSHD HLL L     +LV  G V+ ++GDL  Y   LL   K A  ++       +P+
Sbjct: 478 ILVSHDMHLLSLVADRLWLVSGGTVKPYEGDLPSYRDLLLTRDKPAGKSKTKAEKPKRPS 537

Query: 541 VDKKQQKRLEAELRQKVSPLKRKQAKLEIDQQKLSERLAELEHLLADGELYDQDNKAKLT 600
            D     R E         +++ +A+LE    K+SE   +L   LAD  LYD++ K +  
Sbjct: 538 RDALLALRAE---------VRKGEARLE----KVSEMRDKLAKKLADPALYDEERKDEAV 584

Query: 601 SVLSERTSLTQTLEESEMQWLELQEEIDTME 631
               +   + +  + +E  WL+  E+++  E
Sbjct: 585 VWQRKYAEVMEAQDRAEDLWLKAVEKLEKAE 615