Pairwise Alignments

Query, 637 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 560 a.a., ATPase component of ABC transporters with duplicated ATPase domain from Dechlorosoma suillum PS

 Score =  554 bits (1427), Expect = e-162
 Identities = 283/554 (51%), Positives = 378/554 (68%), Gaps = 21/554 (3%)

Query: 1   MISINQAQLIRGSKTLLDEASLTIYPGHKVGLVGANGTGKSSLLALIMGHLSLDKGEFSM 60
           MI++    L RG+K +LD AS+TI PG KVGLVG NG GKSSL AL+ G+L  D G+ S+
Sbjct: 1   MITLKNIVLRRGTKVVLDRASVTINPGEKVGLVGRNGAGKSSLFALLNGNLHEDGGDVSI 60

Query: 61  PSGWQIASVAQETPALDMSALEYVLDGDKEYRQLEADLHIAQEHNDGHAIATLHGKIDAI 120
           PS W++A VAQ+ P  + SA ++V++GD      + ++  A+  +DG  +A  +  +   
Sbjct: 61  PSQWRMAQVAQDMPETEQSATDFVIEGDTVLLAAQQEVAAAEASDDGMRMAHAYTALYDA 120

Query: 121 GGYAIRARAGALLAGLGFSEAEQNNPVKSFSGGWRMRLNLAQALLCRSDLLLLDEPTNHL 180
           G +   ARA AL+ GLGF   E + PV SFSGGWRMRL LA+AL+C SDLLLLDEPTNHL
Sbjct: 121 GAHDAPARAQALILGLGFHVDELSQPVNSFSGGWRMRLQLARALMCPSDLLLLDEPTNHL 180

Query: 181 DLDTMYWLEGWIKSYQGTLILISHDRDFIDEIVDEIVHVENQKLNFYKGNYSAFERIRAE 240
           DLD + WLE W+K Y GTL++ISHDR+F+D I +  +H++N KL  Y GNYS FE +RAE
Sbjct: 181 DLDALVWLEAWLKRYTGTLVMISHDREFLDAITNVTLHIDNAKLVRYGGNYSTFEDMRAE 240

Query: 241 RMAQQQVAFERQQKERAHMQSFVDRFRYKASKAKQAQSRLKALERMTELLPSQADSPFYM 300
           +M  QQ    +QQ++ AH+Q F+DRF+ KASKAKQAQSR+KALERM ++ P  AD+ F  
Sbjct: 241 QMLLQQATLAKQQEKIAHLQKFIDRFKAKASKAKQAQSRVKALERMEKIAPVLADAEFTF 300

Query: 301 EFRPPEALPNPLIKMEQVAVGYGDKQ----------ILSKVHLNLVPGARIGLLGRNGAG 350
           EF+ P  LPNP++ +    +GY   +          I+  ++ ++  G RIG+LG NG G
Sbjct: 301 EFKEPLNLPNPMLSLLGADIGYPPAEDAAPGTPPTVIVRGINRSVHAGQRIGILGANGQG 360

Query: 351 KSTLIKLLSGQLSPMTGLYEPNPGLNIGYFAQHQIEFLRLDDTPLQHLVRLAPN------ 404
           KSTL+K ++  L+P+ G      GLNIGYFAQ +++ LR +DTPL+H++RLA        
Sbjct: 361 KSTLVKTIARDLAPIAGDLTEGKGLNIGYFAQQELDVLRPEDTPLEHMIRLAKEVIAAGR 420

Query: 405 -----AREQELRNFLGGFGFNGDMALSPVRPFSGGEKARLVLALLVWQRPNLLLLDEPTN 459
                 +EQ+LRNFLG F F+GDM   PV   SGGEKARLVL ++VWQRPNLLLLDEPTN
Sbjct: 421 SGYVAGKEQDLRNFLGTFNFSGDMVKQPVGTMSGGEKARLVLCMIVWQRPNLLLLDEPTN 480

Query: 460 HLDLEMRHALTMALQTFEGAMVIVSHDRHLLRLTCSDYYLVDQGEVQAFDGDLDDYHQWL 519
           HLDL  R AL++AL  FEG +++VSHDR LLR  C +++LV  G V  +DGDLDDY ++L
Sbjct: 481 HLDLSTREALSVALNEFEGTVMLVSHDRALLRSVCDEFWLVADGAVGPYDGDLDDYQRYL 540

Query: 520 LDAAKAASANQAAN 533
           LD A+ A    +A+
Sbjct: 541 LDEARRAREAASAS 554



 Score = 94.4 bits (233), Expect = 1e-23
 Identities = 70/235 (29%), Positives = 113/235 (48%), Gaps = 21/235 (8%)

Query: 23  TIYPGHKVGLVGANGTGKSSLLALIMGHLSLDKGEFSMPSGWQIASVAQETPALDMSALE 82
           +++ G ++G++GANG GKS+L+  I   L+   G+ +   G  I   AQ+    ++  L 
Sbjct: 344 SVHAGQRIGILGANGQGKSTLVKTIARDLAPIAGDLTEGKGLNIGYFAQQ----ELDVLR 399

Query: 83  YVLDGDKEYRQLEADLHIAQEHNDGHAIATLHGKIDAIGGYAIRARAGALLAGLGFSEAE 142
                  E   LE  + +A+E         + GK   +  +         L    FS   
Sbjct: 400 ------PEDTPLEHMIRLAKEVIAAGRSGYVAGKEQDLRNF---------LGTFNFSGDM 444

Query: 143 QNNPVKSFSGGWRMRLNLAQALLCRSDLLLLDEPTNHLDLDTMYWLEGWIKSYQGTLILI 202
              PV + SGG + RL L   +  R +LLLLDEPTNHLDL T   L   +  ++GT++L+
Sbjct: 445 VKQPVGTMSGGEKARLVLCMIVWQRPNLLLLDEPTNHLDLSTREALSVALNEFEGTVMLV 504

Query: 203 SHDRDFIDEIVDEIVHVENQKLNFYKGNYSAFER--IRAERMAQQQVAFERQQKE 255
           SHDR  +  + DE   V +  +  Y G+   ++R  +   R A++  +  R+Q E
Sbjct: 505 SHDRALLRSVCDEFWLVADGAVGPYDGDLDDYQRYLLDEARRAREAASASRRQVE 559