Pairwise Alignments

Query, 637 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 632 a.a., ATP-binding cassette domain-containing protein from Dyella japonica UNC79MFTsu3.2

 Score =  584 bits (1506), Expect = e-171
 Identities = 309/634 (48%), Positives = 411/634 (64%), Gaps = 9/634 (1%)

Query: 1   MISINQAQLIRGSKTLLDEASLTIYPGHKVGLVGANGTGKSSLLALIMGHLSLDKGEFSM 60
           MI+     L RG++ LL +  L I  G ++G+VG NG GKSSL A + G +  D GE  +
Sbjct: 1   MIAFRHFALRRGARLLLSDIDLVIQSGWRLGVVGRNGCGKSSLFAALQGQVEADAGELDL 60

Query: 61  PSGWQIASVAQETPALDMSALEYVLDGDKEYRQLEADLHIAQEHNDGHAIATLHGKIDAI 120
           PS  ++ASVAQETPAL   A+EYV+ GD+E      D   AQ   D  A+A  H +I+ +
Sbjct: 61  PSRLRLASVAQETPALPDPAIEYVMGGDEELAIALRDELDAQARGDTEAMAKAHHRIEEL 120

Query: 121 GGYAIRARAGALLAGLGFSEAEQNNPVKSFSGGWRMRLNLAQALLCRSDLLLLDEPTNHL 180
            GY  RARAG LL GLGF+       V+ FSGGWR+RLNLA+AL+  S+LLLLDEPTNHL
Sbjct: 121 HGYDARARAGRLLHGLGFAPETHERAVREFSGGWRVRLNLARALMAPSELLLLDEPTNHL 180

Query: 181 DLDTMYWLEGWIKSYQGTLILISHDRDFIDEIVDEIVHVENQKLNFYKGNYSAFERIRAE 240
           DLD + WLE W++ YQGTL++ISHDR+F+D ++   +H+   +   Y GNYSAFER RAE
Sbjct: 181 DLDAVLWLEEWLRRYQGTLLVISHDREFLDGVITHTLHLNEGRAKLYTGNYSAFERQRAE 240

Query: 241 RMAQQQVAFERQQKERAHMQSFVDRFRYKASKAKQAQSRLKALERMTELLPSQADSPFYM 300
           ++  QQ+A ER+Q ERAH+QSF+DRF+ KASKAKQAQSR+K LE+M      +A+  F  
Sbjct: 241 QLRLQQIAHEREQAERAHLQSFIDRFKAKASKAKQAQSRMKRLEKMAGTEAVRAERAFRF 300

Query: 301 EFRPPEALPNPLIKMEQVAVGYGDKQ------ILSKVHLNLVPGARIGLLGRNGAGKSTL 354
           +F  P+ LP+ ++++E+VA GY D+       IL  V   L  G R+GLLG NGAGKSTL
Sbjct: 301 QFAVPDRLPDSMLQLEEVAAGYPDEHGGEPAVILHDVRFRLEAGDRVGLLGPNGAGKSTL 360

Query: 355 IKLLSGQLSPMTGLYEPNPGLNIGYFAQHQIEFLRLDDTPLQHLVRLAPNAREQELRNFL 414
           +K L G+L+P+ G  + +  L IGYFAQH +E L    +PLQHL   AP    Q LR+FL
Sbjct: 361 VKTLVGELAPLGGERKVHKDLKIGYFAQHTVESLHEGSSPLQHLQDKAPGVGTQVLRDFL 420

Query: 415 GGFGFNGDMALSPVRPFSGGEKARLVLALLVWQRPNLLLLDEPTNHLDLEMRHALTMALQ 474
           GG+ F GD A   V  FSGGE+ARL LAL+ W +PNLLLLDEPTNHLDL+MR AL  AL 
Sbjct: 421 GGWNFAGDRAFESVDGFSGGERARLALALIAWDKPNLLLLDEPTNHLDLDMREALADALA 480

Query: 475 TFEGAMVIVSHDRHLLRLTCSDYYLVDQGEVQAFDGDLDDYHQWLLDAAKAASANQAANS 534
            F+GA+V+VSHDRHLL + C  ++ V  G+V+ FDGDLDDY +WL   A+ A+  + A  
Sbjct: 481 DFDGALVLVSHDRHLLGMVCDSFWRVADGKVEGFDGDLDDYARWL--RARGAAPRKTAGD 538

Query: 535 DDTKPAVDKKQQKRLEAELRQKVSPLKRKQAKLEIDQQKLSERLAELEHLLADGELYDQD 594
            D  PAV    ++R  A  R+     ++K  KLE     + + L +LE  LA+  +Y+  
Sbjct: 539 TDGAPAVSAADRRRAAAAQRENEKATRQKVKKLETRMAAIDDELGKLEAKLAEPGVYN-G 597

Query: 595 NKAKLTSVLSERTSLTQTLEESEMQWLELQEEID 628
           + A+L  +   +  L +  E  E QWLEL E ++
Sbjct: 598 STAELMKLGQRQGELRREKETLEAQWLELYELLE 631