Pairwise Alignments

Query, 637 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 645 a.a., ATP-binding cassette domain-containing protein from Ralstonia sp. UNC404CL21Col

 Score =  668 bits (1724), Expect = 0.0
 Identities = 348/642 (54%), Positives = 439/642 (68%), Gaps = 14/642 (2%)

Query: 1   MISINQAQLIRGSKTLLDEASLTIYPGHKVGLVGANGTGKSSLLALIMGHLSLDKGEFSM 60
           MI  +   L RG+K L D A+ T+ PG +VGLVG NG+GKS+L +++ G L  D GE ++
Sbjct: 1   MIRFDDLVLQRGTKVLFDHATATLNPGERVGLVGVNGSGKSTLFSMLRGELHADGGEVAI 60

Query: 61  PSGWQIASVAQETPALDMSALEYVLDGDKEYRQLEADLHIAQEHNDGHAIATLHGKIDAI 120
           P  WQ+A VAQETPA+D SAL+Y LDGD   R +E  L  A+  +DGHA A  H      
Sbjct: 61  PPTWQVAHVAQETPAVDRSALDYTLDGDTRLRDIERRLAAAEAAHDGHAQAEAHTAFADA 120

Query: 121 GGYAIRARAGALLAGLGFSEAEQNNPVKSFSGGWRMRLNLAQALLCRSDLLLLDEPTNHL 180
            GY   ARA ALL GLGF+ A+   PV SFSGGWRMRLNLAQAL+C SDLLLLDEPTNHL
Sbjct: 121 DGYTAPARAQALLLGLGFTMAQTTQPVASFSGGWRMRLNLAQALMCPSDLLLLDEPTNHL 180

Query: 181 DLDTMYWLEGWIKSYQGTLILISHDRDFIDEIVDEIVHVENQKLNFYKGNYSAFERIRAE 240
           DLD + WLE W+  Y GTL++ISHDR+F+D + +  +H+E+QKL  Y GNY+ FE  R +
Sbjct: 181 DLDAVVWLEDWLSRYAGTLVMISHDREFLDGVCNVTLHIEHQKLKRYGGNYTQFETQRLQ 240

Query: 241 RMAQQQVAFERQQKERAHMQSFVDRFRYKASKAKQAQSRLKALERMTELLPSQADSPFYM 300
           +MA Q+ ++ RQQK+ AH++SF+ RF+ KASKAKQAQSR+KALERM  L P  A + F  
Sbjct: 241 QMALQEASYARQQKQIAHLESFITRFKAKASKAKQAQSRVKALERMERLAPVHAAAGFSF 300

Query: 301 EFRPPEALPNPLIKMEQVAVGYGDKQ------ILSKVHLNLVPGARIGLLGRNGAGKSTL 354
           EFR PEA PNP++  E V  GY          IL  +  ++  G RIGLLG NG GKSTL
Sbjct: 301 EFREPEAAPNPMLTFEGVDCGYPGPSVDEPITILKHLTFSIQTGQRIGLLGANGQGKSTL 360

Query: 355 IKLLSGQLSPMTGLYEPNPGLNIGYFAQHQIEFLRLDDTPLQHLVRLAPNAREQELRNFL 414
           +K L+  L+P++G      GL IGYFAQHQ+E L    +PL HL RLAP+ REQELR+FL
Sbjct: 361 VKTLAETLAPLSGTIRRGKGLQIGYFAQHQLETLDDHASPLLHLARLAPDVREQELRDFL 420

Query: 415 GGFGFNGDMALSPVRPFSGGEKARLVLALLVWQRPNLLLLDEPTNHLDLEMRHALTMALQ 474
           G F F GDMA SP+ PFSGGEKARL LAL+VWQRPNLLLLDEPTNHLDL+ R ALTMAL 
Sbjct: 421 GSFNFRGDMATSPIEPFSGGEKARLALALIVWQRPNLLLLDEPTNHLDLDTREALTMALA 480

Query: 475 TFEGAMVIVSHDRHLLRLTCSDYYLVDQGEVQAFDGDLDDYHQWLLD---AAKAASANQA 531
            F+G +++VSHDRHLLR T   + LV QG V  FDGDLDDY  WLL    A +AA+  QA
Sbjct: 481 QFDGTLILVSHDRHLLRATTDQFLLVGQGTVAPFDGDLDDYRDWLLKQAAAKRAAAGAQA 540

Query: 532 ANSD-DTKPAVDKKQQKRLEAELRQKVS----PLKRKQAKLEIDQQKLSERLAELEHLLA 586
           A++D D  PA +++ QKR EA  RQ+++    PL++    +E     L +  AELE  LA
Sbjct: 541 ASADADGAPATNRRDQKREEAAERQRLNALRKPLQKNVDAIEKRMAPLQKEKAELEAFLA 600

Query: 587 DGELYDQDNKAKLTSVLSERTSLTQTLEESEMQWLELQEEID 628
           DG  Y++ NKA++   L  +  L   L+E E +WLEL E+++
Sbjct: 601 DGAAYEEANKARMMESLRRQAELNAELDELEERWLELHEQLE 642