Pairwise Alignments

Query, 533 a.a., oxidoreductase, GMC family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 563 a.a., GMC family oxidoreductase (RefSeq) from Shewanella amazonensis SB2B

 Score =  793 bits (2049), Expect = 0.0
 Identities = 388/535 (72%), Positives = 442/535 (82%), Gaps = 3/535 (0%)

Query: 1   MAIVDPIVTGLNAGWLHTDASQLQAN---QQFEADVVIVGTGAGGGVAAEILTQAGLSVI 57
           MAIVDPI  GL +GW H D +  Q +   Q  EADVVI+GTGAGGGVAAEILTQAGLSVI
Sbjct: 1   MAIVDPIYEGLASGWKHLDGALYQGSDKPQTLEADVVIIGTGAGGGVAAEILTQAGLSVI 60

Query: 58  MIEAGPLKSSSDFNMEERVAYPNLYQQAAAMKTADKAIGIFQGRAVGGSTTINWTTSIRT 117
           M+E GPL+SS DF+MEER AYPNLYQQAAAMKTADKAIGIFQGRAVGGSTT+NWTTSIRT
Sbjct: 61  MVEKGPLRSSRDFDMEERTAYPNLYQQAAAMKTADKAIGIFQGRAVGGSTTVNWTTSIRT 120

Query: 118 PKEALAFWAQHKSVAGLDPEALAPWFDQMEQRLNIHEWNYEPNRNNGALKQGCINLGWDY 177
           P E LA+W    +V GL    L PWF+QME RLNI +W +EPNRNNG L++GC  LGWDY
Sbjct: 121 PPETLAYWQSEFAVQGLSANELEPWFEQMESRLNISQWAFEPNRNNGMLRRGCEQLGWDY 180

Query: 178 TVIKRNVAGCWNTGYCGMGCPVNAKQSMLVTTIPSALEKGAQLISRAKVVKIEHHNGQVF 237
           TVIKRNV GCWNTGYCGMGCPVNAKQSMLVTTIP+AL  GA L+SR +  +IEHH  +VF
Sbjct: 181 TVIKRNVLGCWNTGYCGMGCPVNAKQSMLVTTIPAALSAGATLLSRFEATQIEHHADKVF 240

Query: 238 ALKAQALDVNLRPTAVELLFKAKHYILSAGAIHTPTLMMRSEVPDPHQLLGKRTFLHPTV 297
            +  +ALD NL     +L+ KA+HYIL+ GAIHTP LMMRS + DP QLLGKRTFLHPTV
Sbjct: 241 GIWVRALDQNLALRPEKLMLKARHYILAGGAIHTPVLMMRSGLADPMQLLGKRTFLHPTV 300

Query: 298 LSGGVFADTINAHSGAPQSIYSDEFVWKNGADGELGYKLEVPPVHPILIASKTIGYGVSH 357
           LSG VF + IN HSGAPQSIYSD+FVW++GA GELGYKLEVPP+HP+LIASKT+G+G SH
Sbjct: 301 LSGAVFDEAINGHSGAPQSIYSDQFVWRDGAAGELGYKLEVPPIHPVLIASKTLGFGKSH 360

Query: 358 AELMAQFNQLQVTIALIRDGYHPDSQGGQVHLTPTGFSLDYPLTDAFWRAVRRAYASMAE 417
           AELMA FNQLQV IAL+RDG+H  SQGG V L   GF LDYPLT+ FWRA R A+ASMAE
Sbjct: 361 AELMANFNQLQVVIALVRDGFHSQSQGGSVGLEGKGFKLDYPLTEPFWRAARAAFASMAE 420

Query: 418 LQFSAGALKVLPISDGMPYLSSWKEAKESIAQMDLAPLKTVVASAHVMGGCPLGEDEKLS 477
           LQF+AGA +VLPIS+G+ YL+SW+EAK +IA M LAPLKTVVASAHVMGGCP+GED+  +
Sbjct: 421 LQFAAGARRVLPISEGVGYLNSWQEAKAAIADMSLAPLKTVVASAHVMGGCPMGEDKTKT 480

Query: 478 MVNSYGQSHYLNNLSVMDGSIFPTSLGANPQLSIYGITARNATALAQKLKDGREP 532
           MV+S GQSHYL NLSVMDGS+FPTSLGANPQLSIYG+ A+NATALA +L  G  P
Sbjct: 481 MVDSLGQSHYLENLSVMDGSVFPTSLGANPQLSIYGMVAKNATALAGRLAPGSTP 535