Pairwise Alignments

Query, 533 a.a., oxidoreductase, GMC family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 578 a.a., Cholesterol oxidase ChoD (cholesterol-O2 oxidoreductase) from Mycobacterium tuberculosis H37Rv

 Score = 49.3 bits (116), Expect = 4e-10
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 42/297 (14%)

Query: 32  DVVIVGTGAGGGVAAEILTQAGLSVIMIEAGPLKSSSDF-----NMEERVAYPNLYQQAA 86
           DV+I+G+G GG V A  LT+ G  V ++EAG   S  +F     ++ + +  P L     
Sbjct: 6   DVLIIGSGFGGSVTALRLTEKGYRVGVLEAGRRFSDEEFAKTSWDLRKFLWAPRLGCYGI 65

Query: 87  AMKTADKAIGIFQGRAVGGSTTINWTTSIRTPKEALAFWAQHKSVAGLDPEALAPWFDQM 146
                 + + I  G  VGG  ++N+  ++  P E      Q   +     E L P + Q 
Sbjct: 66  QRIHPLRNVMILAGAGVGGG-SLNYANTLYVPPEPFFADQQWSHITDWRGE-LMPHYQQA 123

Query: 147 EQRLNIHEWNYEPNRNNGALKQGCINLGWDYTVIKRNV---------------------- 184
           ++ L + + N      +  +K+    +G+  T +   V                      
Sbjct: 124 QRMLGVVQ-NPTFTDADRIVKEVADEMGFGDTWVPTPVGVFFGPDGTKTPGKTVPDPYFG 182

Query: 185 ------AGCWNTGYCGMGCPVNAKQSMLVTTIPSALEKGAQLISRAKVVKIEHHNGQVFA 238
                  GC   G C  GC   AK +++   +  A   GAQ+I    V   E  +  ++ 
Sbjct: 183 GAGPARTGCLECGCCMTGCRHGAKNTLVKNYLGLAESAGAQVIPMTTVKGFERRSDGLWE 242

Query: 239 LKAQALDVNLRPTAVELLFKAKHYILSAGAIHTPTLMM----RSEVPDPHQLLGKRT 291
           ++       LR       F A   +L+AG   T  L+     R  +P   + LG  T
Sbjct: 243 VRTVRTGSWLRRD--RRTFTATQLVLAAGTWGTQHLLFKMRDRGRLPGLSKRLGVLT 297



 Score = 45.4 bits (106), Expect = 6e-09
 Identities = 24/78 (30%), Positives = 40/78 (51%)

Query: 455 LKTVVASAHVMGGCPLGEDEKLSMVNSYGQSHYLNNLSVMDGSIFPTSLGANPQLSIYGI 514
           L  +  +AH +GG  +G+D +  +++ Y + +    L V+DG+    +LG NP LSI   
Sbjct: 462 LFNIPLTAHFLGGAVIGDDPEHGVIDPYHRVYGYPTLYVVDGAAISANLGVNPSLSIAAQ 521

Query: 515 TARNATALAQKLKDGREP 532
             R A+    K +  R P
Sbjct: 522 AERAASLWPNKGETDRRP 539