Pairwise Alignments

Query, 234 a.a., sugar fermentation stimulation protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 256 a.a., DNA/RNA nuclease SfsA from Vibrio cholerae E7946 ATCC 55056

 Score =  264 bits (675), Expect = 1e-75
 Identities = 136/231 (58%), Positives = 163/231 (70%), Gaps = 5/231 (2%)

Query: 1   MHFTPALKPGKLLKRYKRFLADVQLEDGSEITVHCPNTGSMRNCLFPGETLWFSTSSNTK 60
           MHF+P L+ G LLKRYKRFLADV LEDGS IT+HC NTG+M  C  PG T+WFSTS N K
Sbjct: 13  MHFSPPLQKGTLLKRYKRFLADVTLEDGSVITMHCANTGAMTGCAEPGSTVWFSTSDNPK 72

Query: 61  RKYAHTWELMTTPTGALIGIHSGNANALVEEALNKGIITELTGYDSLRREVKYGDENSRI 120
           RKYAH+WEL  T  G  I +++  ANALV EA+  G I +L GYD+L  EVKYG ENSRI
Sbjct: 73  RKYAHSWELTQTQAGHWICVNTARANALVVEAILAGEIPQLRGYDALSTEVKYGHENSRI 132

Query: 121 DILLECAQKTACYIEVKSCTL-----QENGQGYFPDAVSLRGQKHLRELMHMASLGHRAV 175
           DILL+   +  C+IEVKS TL      + GQGYFPDAV+ RGQKHLREL  +A  G R++
Sbjct: 133 DILLKSDSQPHCFIEVKSVTLLDEIQGDKGQGYFPDAVTTRGQKHLRELAEVAKDGSRSI 192

Query: 176 LLFVVQHTDIMSVAPAAHIDPEYANLLKKSVLSGVEVLAYRCEISPSEIHL 226
           LLF V H+ I  VAPA HID  Y+ LLK +  +GVEVL Y+  +S  EI +
Sbjct: 193 LLFAVLHSGIEKVAPALHIDANYSQLLKAAQEAGVEVLCYKASLSKHEIRM 243