Pairwise Alignments

Query, 299 a.a., glutamyl-tRNA synthetase domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 474 a.a., glutamate--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  143 bits (361), Expect = 7e-39
 Identities = 89/261 (34%), Positives = 133/261 (50%), Gaps = 22/261 (8%)

Query: 18  RFAPSPSGALHFGSLVAALGSYLRARSLGGKWLIRIEDIDPPREVKGAADDILRTLEAYG 77
           RFAPSP+G LH G    AL S+L A+S GG++++RIED D  R  + A D I+  +   G
Sbjct: 6   RFAPSPTGYLHVGGARTALYSWLYAKSQGGEFVLRIEDTDLERSTQAAVDAIIEGMTWLG 65

Query: 78  FEWDDTVLYQSARTDAYQAKLDQLLAQDDAYFCQCSRKQIQAMGGIYDGRCHQLATPHQS 137
            EWD+   YQ+ R D Y   +DQLLA+  AY C   ++ +  +    +            
Sbjct: 66  LEWDEGPYYQTKRFDRYNQVIDQLLAEGKAYKCYAPKELLDEIRAEQEANKEMPRYDANH 125

Query: 138 GAIRLVNRAQ----------------VAEFTDNLMGKVVVDHDFATEDFIIKRSDGLYAY 181
             I+ VN A                    F D + G++ + +D   +D II+R+DG   Y
Sbjct: 126 PKIKAVNDAAKEGEPCCIRFRNPKEGSVVFDDQIRGRIEIRND-QLDDLIIRRTDGTPTY 184

Query: 182 QLAVVLDDAHQGISEVVRGCDLIEASCRQLSLYQSLGLTAPQWLHLPLACLTPGFKLSKQ 241
              VV+DD   GIS V+RG D I  + RQ+++Y+++G T P + H  +     G KLSK+
Sbjct: 185 NFCVVVDDVDMGISHVIRGEDHINNTPRQINIYKAMGATIPTFAHCAMILGDDGAKLSKR 244

Query: 242 NHAQAI-----DKQHPQASLN 257
           + A ++     D   P+A LN
Sbjct: 245 HGAVSVMQYRDDGYLPEALLN 265