Pairwise Alignments

Query, 299 a.a., glutamyl-tRNA synthetase domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 469 a.a., glutamyl-tRNA synthetase (RefSeq) from Shewanella amazonensis SB2B

 Score =  145 bits (365), Expect = 2e-39
 Identities = 92/258 (35%), Positives = 141/258 (54%), Gaps = 20/258 (7%)

Query: 18  RFAPSPSGALHFGSLVAALGSYLRARSLGGKWLIRIEDIDPPREVKGAADDILRTLEAYG 77
           RFAPSP+G LH G    AL S+L AR+  G++++RIED D  R  + A D IL  +E   
Sbjct: 6   RFAPSPTGFLHVGGARTALYSWLHARANQGEFVLRIEDTDLERSTQEAVDAILEGMEWLN 65

Query: 78  FEWDDTVLYQSARTDAYQAKLDQLLAQDDAYFCQCSRKQIQAM---------GGIYDGRC 128
             WD+   YQ+ R D Y   +DQ+L    AY C CS+++++A+            YDG C
Sbjct: 66  LNWDEGPYYQTKRFDRYNEIIDQMLKAGTAYKCYCSKERLEAVREEQAAKGERQKYDGCC 125

Query: 129 HQLATPHQSG---AIRLVN-RAQVAEFTDNLMGKVVVDHDFATEDFIIKRSDGLYAYQLA 184
              A P   G    +R +N +     F D++ G++ + ++   +D II+R+DG   Y   
Sbjct: 126 RG-AAPRAEGEPHVVRFLNPQGGSVVFDDHVRGRIEIANE-ELDDLIIRRTDGSPTYNFC 183

Query: 185 VVLDDAHQGISEVVRGCDLIEASCRQLSLYQSLGLTAPQWLHLPLACLTPGFKLSKQNHA 244
           VV+DD   GI+ VVRG D I  + RQ+++ ++LG   P++ H+ +     G KLSK++ A
Sbjct: 184 VVVDDWDMGITHVVRGEDHINNTPRQINILKALGAPIPEYAHVSMILGDDGAKLSKRHGA 243

Query: 245 QAI-----DKQHPQASLN 257
            ++     D   P+A LN
Sbjct: 244 VSVMQYRDDGYLPEALLN 261