Pairwise Alignments

Query, 438 a.a., polyA polymerase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 383 a.a., tRNA nucleotidyltransferase, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 70.5 bits (171), Expect = 9e-17
 Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 35/231 (15%)

Query: 33  QAYLVGGGVRDLLLGLEPKDFDVVTNATPEEIKKLFRNCRVVGRRFRLAHIVFGRDVIEV 92
           + YLVGG VRD+L+G  P++ D+   A+     +   + R VG+R  +  I         
Sbjct: 2   KTYLVGGAVRDILIGRTPREHDIAFEASVAHFLQANPSARKVGKRIDVYLI--------- 52

Query: 93  ATFRGHHGESNEKISKANAEGRLLRDNVYGEIDEDAERRDFTVNALYYDISDYSIRSYGG 152
                            N E R ++    G+I  D  +RDFT+NAL  + +D ++ ++  
Sbjct: 53  ----------------GNVEHRPVQG---GDIRADLLQRDFTINALALE-ADGTLHAHPD 92

Query: 153 GMEDLKAGTLRLIGDPETRYREDPVRMLRAVRFATKL-SMTIDEVTAKPIKQLAP--LLK 209
            + DL+A  +R           DPVR+LRA RFA +L  M++ + T + ++ +A    L 
Sbjct: 93  ALADLRASIIRPASPGALM--ADPVRVLRAARFAAQLPEMSLAQETLEAMRAVAAAGYLA 150

Query: 210 DIPAARMYEEVLKLFFAGKAVANFDMMQEYKLFAPLFPQVDALLKEAPKGP 260
           ++P  ++  E LK   +      F  + +     P F +V A L   P GP
Sbjct: 151 EMPCEQVCRETLKALGSPAPERFFISLAKGGCLQPWFAEV-ADLTGVPAGP 200