Pairwise Alignments

Query, 255 a.a., transcriptional regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 53.5 bits (127), Expect = 3e-12
 Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 12/128 (9%)

Query: 110 VALYQVERNSLDQESAMLLGIRGLLFTDQRMDLMLTGLRKMVADELWYDRTLLSKMFRRV 169
           V +  V  ++ D E+ +  G  G L  D   D ++  L++ +  E  +  ++   +  R 
Sbjct: 79  VVILTVSDSAADIEALVKAGADGYLLKDTEPDQLVALLKQAMQGEKAFSESVERYLLNR- 137

Query: 170 VQKLDGQNDMPADTVAMLQALTSRERTIIQFVSSGARNKEIAHRLCISEHTVKAHISSIF 229
                        T    +ALT RE  I+  V+ G RN++IA RL ISE TVK H+ S+ 
Sbjct: 138 -----------EHTSNPFEALTEREMQIMSEVAKGYRNRQIADRLFISESTVKVHMKSLL 186

Query: 230 RKTQSRNR 237
           +K    +R
Sbjct: 187 KKLDVPSR 194