Pairwise Alignments

Query, 255 a.a., transcriptional regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 209 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 50.8 bits (120), Expect = 2e-11
 Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 16/136 (11%)

Query: 106 PHIPVALYQVERNSLDQESAMLLGIRGLLFTDQRMDLMLTGLRKMVADELWYDRTLLSKM 165
           P +P+ +                G  G +     M  ++  L +++  E ++   LL   
Sbjct: 78  PDLPIVVISASEEPSVVSQVKSHGAFGFIPKSSDMRSLIAALNQVLNGEPYFPAHLL--- 134

Query: 166 FRRVVQKLDG--QNDMPADTVAMLQALTSRERTIIQFVSSGARNKEIAHRLCISEHTVKA 223
                  +DG   ND+ A+ VA   ALT ++  ++  +S G  NK+IA+ L +SE T+KA
Sbjct: 135 -------VDGFVGNDL-AEKVA---ALTPQQYKVLGMLSDGLLNKQIAYELNVSEATIKA 183

Query: 224 HISSIFRKTQSRNRVE 239
           H+++IFRK   +NR +
Sbjct: 184 HMTAIFRKLGVKNRTQ 199