Pairwise Alignments

Query, 409 a.a., D-3-phosphoglycerate dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 546 a.a., D-3-phosphoglycerate dehydrogenase from Synechococcus elongatus PCC 7942

 Score =  180 bits (456), Expect = 1e-49
 Identities = 110/322 (34%), Positives = 181/322 (56%), Gaps = 14/322 (4%)

Query: 12  KILLLEGVHQSAVDVFERAGYTNIEYHKASLGDEALHESIKDAHFIGIRSRTQLSADVLK 71
           K+L+ + + Q  +D+  +    ++   K  L    L + I +   + +RS T+++A+V++
Sbjct: 20  KVLVSDPIDQVGLDILSQVAQVDV---KTGLSPSELAQIIGEYDALMLRSGTRVTAEVIE 76

Query: 72  RAEKLIAIGCFCIGTNQVDLATAESLGIPVFNAPFSNTRSVAELVLGEIIMLMRGIPERN 131
             +KL  IG   +G + VD+  A   GI V N+P  NT + AE  L  ++ L R IP+ N
Sbjct: 77  AGQKLRIIGRAGVGVDNVDVPAATRRGIVVVNSPEGNTIAAAEHTLAMMLSLSRHIPDAN 136

Query: 132 AIAHRGGWMKTAAGSYEVRGKTLGVIGYGHIGTQLGILAETLGMRVVFFDIEDKLPLGNA 191
           A    GGW + +    EV  KTLGV+G G IG+ +  +A+ +GM+++ +D    +    A
Sbjct: 137 ASTKSGGWDRKSFVGTEVYKKTLGVVGLGKIGSHVATVAKAMGMKLLAYD--PFISAERA 194

Query: 192 QQIHS----MEQLLAQADVVSLHVPETPQTKDMISTAEFAAMRKGSIFINASRGTVVDID 247
           +QI +    ++ L  +AD ++LH+P+TP+T ++I+    A M+  +  IN +RG V++  
Sbjct: 195 EQIGARLVELDILFQEADYITLHIPKTPETANLINAETLAKMKPTTRIINCARGGVINEQ 254

Query: 248 ALTVALKERHLAGAAIDVFPVEPQSNDDEFISPLRGL-DNVLLTPHVGGSTAEAQENIGI 306
           AL  A+    + GAA+DV+  EP   D    SPLR L  N++LTPH+G ST EAQ N+ +
Sbjct: 255 ALADAIAAGKIGGAALDVYDQEPLQAD----SPLRALGKNLILTPHLGASTTEAQVNVAV 310

Query: 307 EVAGKLAKYSDNGSTVSAVNFP 328
           +VA ++          SAVN P
Sbjct: 311 DVAEQIRDVLLGLPARSAVNIP 332



 Score = 26.6 bits (57), Expect = 0.002
 Identities = 41/180 (22%), Positives = 69/180 (38%), Gaps = 19/180 (10%)

Query: 225 EFAAMRKGSIFINASRGTVVDIDALTVALKER-HLAGAAIDVFPVEPQSNDDEFISPLRG 283
           E AA +   I + A +G       LT AL+ER +   A I+          +  I  +  
Sbjct: 374 ELAAQQSQPIVVAALKGL------LTQALRERVNYVNAMIEA--------KERGIRIIET 419

Query: 284 LDNVLLTPHVGGSTAEAQENIGIEVAGKLAKYSDNGSTVSAVNFPEVSLPMHKGTSRLLH 343
            D  +   + GGS          E     A   D    ++ V+   V++P  +    L  
Sbjct: 420 RDESVRDDYAGGSLQLVATGSNGEHRVMGALLGDGEIRITNVDEFPVNVPPSR--YMLFT 477

Query: 344 IHQNRPGVLIKINKAFSEKGINIAAQYLQTTAEIG--YVVMEVDTHQAEEALVELKAIDG 401
            H++ PG++ KI        +NIA+  +      G   +V+ +D    E  L E+  + G
Sbjct: 478 RHRDMPGIIGKIGSLLGSFNVNIASMQVGRRIVRGDAVMVLSLDDPLPEGILAEITKVAG 537