Pairwise Alignments

Query, 409 a.a., D-3-phosphoglycerate dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 317 a.a., D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) from Shewanella loihica PV-4

 Score =  137 bits (346), Expect = 3e-37
 Identities = 85/252 (33%), Positives = 129/252 (51%), Gaps = 10/252 (3%)

Query: 59  IRSRTQLSADVLKRAEKLIAIGCFCIGTNQVDLATAESLGIPVFNAPFSNTRSVAELVLG 118
           + ++T L AD L+    L  IG    GTN VDL  A  LGI V N P     +VA++V  
Sbjct: 49  LTNKTVLDADALRALPDLEYIGVLATGTNVVDLNAARELGIKVTNVPGYGPDAVAQMVFA 108

Query: 119 EIIMLMRGIPERNAIAHRGGWMK------TAAGSYEVRGKTLGVIGYGHIGTQLGILAET 172
            I+   + + + +     G W +      T A    ++GKTLG++G+G IG Q+  +A+ 
Sbjct: 109 HILHHTQRLSDHHNAVVAGAWSQAPDFCFTLAPLQSLKGKTLGLVGFGDIGRQVANIAKA 168

Query: 173 LGMRVVFFDIEDKLPLGNAQQIHSMEQLLAQADVVSLHVPETPQTKDMISTAEFAAMRKG 232
             MRV+      K  L         E L A AD++SLH P TP T+ +I+    +AM+  
Sbjct: 169 FQMRVLVNTPSIKHDLPEGVSWCEREALFASADIISLHCPLTPDTEKLINRERLSAMKPN 228

Query: 233 SIFINASRGTVVDIDALTVALKERHLAGAAIDVFPVEPQSNDDEFISPLRGLDNVLLTPH 292
           +I IN +RG +VD  AL  AL +  +A A +DV   EP   D    +PL    ++ ++PH
Sbjct: 229 AILINTARGGLVDEQALANALAQGEIAAAGVDVLSSEPPQAD----NPLLSAPHISISPH 284

Query: 293 VGGSTAEAQENI 304
              +T EA++ +
Sbjct: 285 NSWATKEARQQL 296