Pairwise Alignments

Query, 318 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 323 a.a., tRNA-modifying protein YgfZ from Vibrio cholerae E7946 ATCC 55056

 Score =  196 bits (497), Expect = 8e-55
 Identities = 108/307 (35%), Positives = 174/307 (56%), Gaps = 7/307 (2%)

Query: 16  MPPLMLANLSHLGLIKVAGEQGRSFIHGQVTADISSLETNQWRWGAHCDPKGKMLASFRT 75
           +P LML +L+  G I + G   ++++ GQVT ++ SL+  Q  +GAHCD KGK+ + FR 
Sbjct: 18  LPELMLTHLTGWGAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRL 77

Query: 76  FTIKDALLLLMPKDTIEVDLPQLQKYAVFSKATLSNASEEWCLLGVAGEQANQFVTQHFG 135
           F   D   +  P+  +EV+L +L+KYA+FSK T++ +S+    LGV G QA+ ++     
Sbjct: 78  FHHHDGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSD--IALGVMGSQADAWIDTVSE 135

Query: 136 EVAQELTLTEHGAILKDADRFILVLQPQAASALIA--EHTVFDASAWQALEIAAGYPNLA 193
                  +    A+     R++L++  + A   +   +    + S W  ++I    P + 
Sbjct: 136 TTGDVRRIAGGTAVRMSPQRWLLLVNAEQAEQYVNAWQGLHVEQSLWTRMDIEEAVPVVT 195

Query: 194 PSHANQYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTSLTINLE 253
            +  N+++PQ  N+QA++GISF KGCY GQETVAR KYRG NKRA+YI+ G  S  ++ +
Sbjct: 196 QTAQNEHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQD 255

Query: 254 --TSLEIALEDGYRKGGQIIEFVQRGNQVLL-TAVLANDTENDAKLRFTEDEQSSLTVQP 310
               LE A+ + +R  G ++   +  + + +   VL ND E+D KLR      +   +QP
Sbjct: 256 EPVVLERAVGENWRSAGALLTHYRFTDSIAIGLIVLPNDLEHDVKLRLAAQPDTRWHIQP 315

Query: 311 LPYSLDE 317
           LPYSL +
Sbjct: 316 LPYSLSD 322