Pairwise Alignments

Query, 318 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 315 a.a., Glycine cleavage T protein (aminomethyl transferase) from Pseudomonas syringae pv. syringae B728a

 Score =  141 bits (355), Expect = 2e-38
 Identities = 96/299 (32%), Positives = 143/299 (47%), Gaps = 8/299 (2%)

Query: 24  LSHLGLIKVAGEQGRSFIHGQVTADISSLETNQWRWGAHCDPKGKMLASFRTFTIKDALL 83
           LSH G++ V G     F+ GQ+T +++ L  +    GA C  KG+M +SFR     D  L
Sbjct: 12  LSHEGVLAVRGVDASKFLQGQLTCNLNYLNEDTSSLGARCTQKGRMQSSFRIVFEGDGCL 71

Query: 84  LLMPKDTIEVDLPQLQKYAVFSKATLSNASEEWCLLGVAGEQA-----NQFVTQHFGEVA 138
           L M  + IE  L  L+KYAVFSK+ L++ S +W   G+    A        + Q    V 
Sbjct: 72  LAMAGELIEAQLLDLRKYAVFSKSKLTDESADWVRFGLQDGDAALVSLGLDLPQQTDSVV 131

Query: 139 QELTLTEHGAILKDADRFILVLQPQAASALIAEH-TVFDASAWQALEIAAGYPNLAPSHA 197
           +   L         A+ ++   +  +  + +A H      + W   +I  G   +  S  
Sbjct: 132 RANDLMAIRVSPGRAELWVRSAEVDSIKSRLASHLNEAPLNDWLLGQIRVGIGQVFGSTR 191

Query: 198 NQYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTSLTINLETSLE 257
            +++PQM NLQA+ G+SF KGCY GQE VARM+Y G  KR LY L  +        T+L 
Sbjct: 192 EEFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSGEEIPQPGTALF 251

Query: 258 IALEDGYRKGGQIIEFVQRGNQVLLTAVLANDTENDAKLRFTEDEQSSLTVQPLPYSLD 316
             +       G ++   Q G  + L AVL  D   D ++     E ++L +  LPY+LD
Sbjct: 252 SPVHAS--AVGNVVIAAQDGQNIELLAVLQGDAAEDGRINLGSPEGAALQMSELPYTLD 308