Pairwise Alignments

Query, 318 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 321 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  399 bits (1026), Expect = e-116
 Identities = 198/319 (62%), Positives = 240/319 (75%), Gaps = 2/319 (0%)

Query: 1   MTIAVSTPNWDLDASMPPLMLANLSHLGLIKVAGEQGRSFIHGQVTADISSLETNQWRWG 60
           MT  VS   W LD+  P L L+ L+HLGL+ V GEQG SFIHGQVTADIS+LE  QWRWG
Sbjct: 1   MTFTVSQAAWALDSEGPALTLSLLNHLGLVSVTGEQGNSFIHGQVTADISALEPGQWRWG 60

Query: 61  AHCDPKGKMLASFRTFTIKDALLLLMPKDTIEVDLPQLQKYAVFSKATLSNASEEWCLLG 120
           AHCDPKG+MLA+FRTF + DAL++L P+  +EV L QL+KYAVFSKA L + S E  LLG
Sbjct: 61  AHCDPKGRMLATFRTFKLGDALMMLEPRSALEVSLAQLKKYAVFSKAELVDMSSELTLLG 120

Query: 121 VAGEQANQFVTQHFGEVAQELTLTEHGAILKDADRFILVLQPQAASALIAE--HTVFDAS 178
           V+G +A  FV +HFG    ++  TE G +LKD +RFIL+L    A ALI +    ++ A 
Sbjct: 121 VSGPEAAGFVARHFGTAEADVFSTEQGTVLKDGERFILILDKANACALIEKSGQPLYGAG 180

Query: 179 AWQALEIAAGYPNLAPSHANQYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKRA 238
            WQALEI AGYPN+A  HA++Y+PQMCNLQA+ GISFNKGCYMGQETVAR KYRGGNKRA
Sbjct: 181 VWQALEIRAGYPNIAAGHASEYIPQMCNLQALGGISFNKGCYMGQETVARTKYRGGNKRA 240

Query: 239 LYILHGTTSLTINLETSLEIALEDGYRKGGQIIEFVQRGNQVLLTAVLANDTENDAKLRF 298
           LYIL G +   + LE++LEIA+E GYRK G IIE V RGN+VL+TAVLANDT  DA LR 
Sbjct: 241 LYILFGESQTPVRLESTLEIAVEGGYRKAGNIIEVVSRGNKVLMTAVLANDTAPDAVLRL 300

Query: 299 TEDEQSSLTVQPLPYSLDE 317
            +D ++S T+ PLPYSL+E
Sbjct: 301 ADDHEASFTLLPLPYSLEE 319