Pairwise Alignments

Query, 318 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 312 a.a., Glycine cleavage T protein (aminomethyl transferase) (NCBI) from Rhodospirillum rubrum S1H

 Score = 72.0 bits (175), Expect = 2e-17
 Identities = 70/245 (28%), Positives = 109/245 (44%), Gaps = 29/245 (11%)

Query: 11  DLDASMPPLMLANLSHLGLIKVAGEQGRSFIHGQVTADISSLETNQWRWGAHCDPKGKML 70
           D  A  PP++       G++ ++G    SF+ G V+ D++     Q  W A   P+GK L
Sbjct: 5   DPSAVSPPVLCPRPDR-GVLGLSGADRVSFLQGLVSNDVTRAGPEQALWAAFLTPQGKYL 63

Query: 71  ASFRTFTI---KDALLLLMPKDTIEVDL-PQLQKYAVFSKATLSNASEEWCLLGVAGEQA 126
             F   ++   + A LLL+ +     DL  +L +Y + SK TL  A   W +  + G  A
Sbjct: 64  HDFFVVSVGEGESARLLLVGEAARLEDLRARLSRYRLRSKVTLDLAGG-WTVAVIPGRNA 122

Query: 127 NQFVTQHFGEVAQELTLTEHGAILKDADRFILV-LQPQAASA----LIAEHT------VF 175
                      A  L L +    ++  D   L  + P+ ++A    L+ E        + 
Sbjct: 123 -----------AASLGLPDRPGAMRALDGGGLAFVDPRLSAAGVHLLLPEAAAKPPLPLG 171

Query: 176 DASAWQALEIAAGYPNLAPSHANQYVPQMCN-LQAINGISFNKGCYMGQETVARMKYRGG 234
           + S WQA  +A G P  +     +    + N  + + G+ F KGCYMGQE  AR KYRG 
Sbjct: 172 EESLWQAHRLALGLPEGSDDLEPEKALLLENGFEELGGVDFKKGCYMGQELTARTKYRGL 231

Query: 235 NKRAL 239
            K+ L
Sbjct: 232 VKKRL 236