Pairwise Alignments

Query, 318 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 328 a.a., tRNA-modifying protein YgfZ from Pantoea sp. MT58

 Score =  200 bits (509), Expect = 3e-56
 Identities = 122/321 (38%), Positives = 179/321 (55%), Gaps = 12/321 (3%)

Query: 8   PNWDLDASMPPLMLANLSHLGLIKVAGEQGRSFIHGQVTADISSLETNQWRWGAHCDPKG 67
           P     +S  PL L +L    L+ + G    +++ GQ+T D+++L+ +     AHCD KG
Sbjct: 8   PRQPAASSRLPLTLMSLDSWALVSITGADSTAYLQGQLTLDVAALDADHHSPAAHCDAKG 67

Query: 68  KMLASFRTFTIKDALLLLMPKDTIEVDLPQLQKYAVFSKATLSNASEEWCLLGVAGEQAN 127
           KM ++ R F   +    L+ ++  +  L +L+KYAVFSK T++ A +E  LLG+AG QA 
Sbjct: 68  KMWSNMRLFHRGEGYAYLIRRELRDTQLTELKKYAVFSKVTMA-ADDECVLLGLAGFQAR 126

Query: 128 QFVTQHFGEVAQ-ELTLTEHGA-----ILKDADRFILVLQPQAASAL---IAEHTVF-DA 177
             +   F  +   E  + + G        + A+RF++V     A AL   + +   F D+
Sbjct: 127 AALANLFDNLPDSEKPVVQQGETTLLWFAQPAERFLIVTSLSQAEALKQKLNDDAQFNDS 186

Query: 178 SAWQALEIAAGYPNLAPSHANQYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKR 237
             W AL+I AG P + P+ + Q++PQ  NLQA++ ISF KGCY GQE VAR KYRG NKR
Sbjct: 187 QQWLALDIEAGIPVIDPATSVQFIPQATNLQALDAISFKKGCYAGQEMVARAKYRGANKR 246

Query: 238 ALYILHGTTSLTINLETSLEIALEDGYRKGGQIIEFVQRGNQV-LLTAVLANDTENDAKL 296
           ALY L G  S        LE+ + + +R+ G ++  VQ  + +  +  VL ND E D+ L
Sbjct: 247 ALYWLAGQASHLPEANAPLELQMGERWRRTGSVLAAVQLDDGISWIQVVLNNDLEPDSVL 306

Query: 297 RFTEDEQSSLTVQPLPYSLDE 317
           R   DE   LT+QPLPYSL E
Sbjct: 307 RVEGDEGGHLTIQPLPYSLAE 327