Pairwise Alignments

Query, 339 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 378 a.a., response regulator from Xanthomonas campestris pv. campestris strain 8004

 Score =  223 bits (569), Expect = 5e-63
 Identities = 127/324 (39%), Positives = 186/324 (57%), Gaps = 10/324 (3%)

Query: 7   ILVVDDTPENIDILVGILGE---DYKVKVAIDGPRALALVTKTLPDLILLDVMMPGMNGY 63
           I++VDD      +L  ++ +   + KV    D   AL+       DL+LLD  MPGM+G 
Sbjct: 30  IVIVDDQMSARTMLRHVIEDIAPELKVYDFGDPLDALSWCEAGRVDLLLLDYRMPGMDGL 89

Query: 64  EVCKLLKQEPLTCHIPVIFVTALSEVADEAQGFALGAVDYITKPVSAPVVKARVKTHLAL 123
           E  + L++ P    IP+I +T + +          G +D++ KP+    ++AR    L L
Sbjct: 90  EFARRLRRLPSHRDIPIILITIVGDEPIRQAALEAGVIDFLVKPIRPRELRARCSNLLQL 149

Query: 124 YDQKRL-------LEQQVKERTQELEETRFEIIRRLGRAAEYKDNETGLHVVRMSHYARL 176
             Q          LEQ++     E+EE   E + RL RA EY+D  T   + RMSH A L
Sbjct: 150 RQQSESVKQRALSLEQRLLASMNEVEERERETLSRLARAIEYRDGGTSAFLERMSHVAGL 209

Query: 177 LAIKLGLPSTFCELLYNASPMHDIGKIGTPDAVLKKPGKLDAEEWKIMQQHAVIGAEIIG 236
           +A +LGL      ++  A+P+HD+GKI  PD+VL KPGKL  +E  +M++H  IG E++ 
Sbjct: 210 VAEQLGLSEEEVRIIEMAAPLHDMGKIAIPDSVLLKPGKLTEDEMNVMKRHPRIGYELLS 269

Query: 237 EHGDPLLQMARRIALTHHEKWDGTGYPNGLSEENIPIEGRIVAIADVFDALTSQRPYKQP 296
              +  +Q+   IAL HHE++DG+GYP+GL  E IP+E RIVA+ADVFDAL S RPYK+ 
Sbjct: 270 GSQNRFIQVGALIALRHHERYDGSGYPDGLVGEAIPLEARIVAVADVFDALLSARPYKEA 329

Query: 297 WTIEATMELLENQAGQHFDPKLVE 320
           WT++A +  L  Q G+ FDP+ V+
Sbjct: 330 WTMDAALAYLYAQRGRLFDPRCVD 353